Protein : Qrob_P0020820.2 Q. robur
Protein Identifier  ? Qrob_P0020820.2 Organism . Name  Quercus robur
Score  97.0 Score Type  egn
Protein Description  (M=1) K12493 - ADP-ribosylation factor GTPase-activating protein 2/3 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 353  
Kegg Orthology  K12493
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0 Synonyms

0 GO Terms

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1279410 15 352 + 338 Gaps:5 84.41 404 80.35 0.0 arf gtpase-activating protein putative
blastp_kegg lcl|pmum:103336893 15 352 + 338 Gaps:5 84.48 406 79.88 0.0 probable ADP-ribosylation factor GTPase-activating protein AGD8
blastp_kegg lcl|pper:PRUPE_ppa006556mg 15 352 + 338 Gaps:5 84.48 406 79.59 0.0 hypothetical protein
blastp_kegg lcl|vvi:100252326 15 352 + 338 Gaps:4 84.44 405 76.61 0.0 probable ADP-ribosylation factor GTPase-activating protein AGD8-like
blastp_kegg lcl|pop:POPTR_0003s09110g 15 352 + 338 Gaps:5 84.41 404 76.83 0.0 UBIQUITIN-SPECIFIC PROTEASE 20 family protein
blastp_kegg lcl|mdm:103436900 15 352 + 338 Gaps:8 84.52 407 77.62 0.0 probable ADP-ribosylation factor GTPase-activating protein AGD9
blastp_kegg lcl|tcc:TCM_015712 15 352 + 338 Gaps:5 84.20 405 79.77 0.0 ADP-ribosylation factor GTPase-activating protein AGD8
blastp_kegg lcl|pop:POPTR_0001s02430g 15 352 + 338 Gaps:7 84.48 406 76.97 0.0 UBIQUITIN-SPECIFIC PROTEASE 20 family protein
blastp_kegg lcl|cic:CICLE_v10011983mg 11 352 + 342 Gaps:6 91.73 375 77.03 0.0 hypothetical protein
blastp_kegg lcl|cit:102625979 15 352 + 338 Gaps:6 84.37 403 77.35 0.0 probable ADP-ribosylation factor GTPase-activating protein AGD8-like
blastp_pdb 2crw_A 15 89 + 75 Gaps:5 52.35 149 43.59 3e-07 mol:protein length:149 ADP-ribosylation factor GTPase-activating pro
blastp_pdb 2p57_A 15 79 + 65 Gaps:2 45.14 144 43.08 3e-07 mol:protein length:144 GTPase-activating protein ZNF289
blastp_uniprot_sprot sp|Q8H100|AGD8_ARATH 15 352 + 338 Gaps:15 84.02 413 64.27 1e-139 Probable ADP-ribosylation factor GTPase-activating protein AGD8 OS Arabidopsis thaliana GN AGD8 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FIQ0|AGD9_ARATH 15 352 + 338 Gaps:17 84.33 402 64.31 5e-136 Probable ADP-ribosylation factor GTPase-activating protein AGD9 OS Arabidopsis thaliana GN AGD9 PE 1 SV 1
blastp_uniprot_sprot sp|O82171|AGD10_ARATH 15 343 + 329 Gaps:19 83.54 395 63.64 4e-114 ADP-ribosylation factor GTPase-activating protein AGD10 OS Arabidopsis thaliana GN AGD10 PE 2 SV 1
blastp_uniprot_sprot sp|O23469|GDL63_ARATH 15 79 + 65 Gaps:6 26.53 245 61.54 5e-14 GDSL esterase/lipase At4g16220 OS Arabidopsis thaliana GN At4g16220 PE 3 SV 2
blastp_uniprot_sprot sp|Q28CM8|ARFG2_XENTR 246 350 + 105 Gaps:4 19.20 526 43.56 2e-08 ADP-ribosylation factor GTPase-activating protein 2 OS Xenopus tropicalis GN arfgap2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5R787|ARFG3_PONAB 15 153 + 139 Gaps:37 32.17 516 36.14 3e-07 ADP-ribosylation factor GTPase-activating protein 3 OS Pongo abelii GN ARFGAP3 PE 2 SV 1
blastp_uniprot_sprot sp|Q3MID3|ARFG2_RAT 240 350 + 111 Gaps:4 20.58 520 41.12 4e-07 ADP-ribosylation factor GTPase-activating protein 2 OS Rattus norvegicus GN Arfgap2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5RAT7|ARFG2_PONAB 246 350 + 105 Gaps:4 19.39 521 42.57 5e-07 ADP-ribosylation factor GTPase-activating protein 2 OS Pongo abelii GN ARFGAP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8N6H7|ARFG2_HUMAN 15 350 + 336 Gaps:6 29.37 521 45.75 5e-07 ADP-ribosylation factor GTPase-activating protein 2 OS Homo sapiens GN ARFGAP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9NP61|ARFG3_HUMAN 15 153 + 139 Gaps:37 32.17 516 36.14 6e-07 ADP-ribosylation factor GTPase-activating protein 3 OS Homo sapiens GN ARFGAP3 PE 1 SV 1
rpsblast_cdd gnl|CDD|178661 15 343 + 329 Gaps:17 83.54 395 63.03 3e-84 PLN03114 PLN03114 ADP-ribosylation factor GTPase-activating protein AGD10 Provisional.
rpsblast_cdd gnl|CDD|197518 15 77 + 63 Gaps:5 57.14 119 25.00 8e-08 smart00105 ArfGap Putative GTP-ase activating proteins for the small GTPase ARF. Putative zinc fingers with GTPase activating proteins (GAPs) towards the small GTPase Arf. The GAP of ARD1 stimulates GTPase hydrolysis for ARD1 but not ARFs.
rpsblast_cdd gnl|CDD|201781 15 73 + 59 Gaps:4 53.85 117 33.33 3e-07 pfam01412 ArfGap Putative GTPase activating protein for Arf. Putative zinc fingers with GTPase activating proteins (GAPs) towards the small GTPase Arf. The GAP of ARD1 stimulates GTPase hydrolysis for ARD1 but not ARFs.
rpsblast_kog gnl|CDD|35925 15 352 + 338 Gaps:66 85.90 454 37.44 2e-63 KOG0706 KOG0706 KOG0706 Predicted GTPase-activating protein [Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35923 15 113 + 99 Gaps:1 25.91 386 27.00 1e-07 KOG0704 KOG0704 KOG0704 ADP-ribosylation factor GTPase activator [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport Cytoskeleton].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 15 351 337 PTHR23180:SF16 none none none
PANTHER 15 351 337 PTHR23180 none none none
SUPERFAMILY 14 76 63 SSF57863 none none none

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting