Protein : Qrob_P0020690.2 Q. robur
Protein Identifier  ? Qrob_P0020690.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=49) PF03168 - Late embryogenesis abundant protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 283  
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0 Synonyms

0 GO Terms

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa014613mg 1 282 + 282 Gaps:33 98.90 272 47.58 2e-61 hypothetical protein
blastp_kegg lcl|mdm:103438483 59 282 + 224 Gaps:17 79.79 282 47.11 3e-61 uncharacterized LOC103438483
blastp_kegg lcl|rcu:RCOM_1034660 56 282 + 227 Gaps:18 88.48 243 48.37 7e-56 hypothetical protein
blastp_kegg lcl|pmum:103319851 51 282 + 232 Gaps:22 84.56 272 47.39 6e-55 uncharacterized LOC103319851
blastp_kegg lcl|gmx:100790243 47 282 + 236 Gaps:7 92.16 255 42.13 4e-54 uncharacterized LOC100790243
blastp_kegg lcl|fve:101291153 1 282 + 282 Gaps:28 98.92 277 43.80 8e-53 uncharacterized protein LOC101291153
blastp_kegg lcl|pxb:103959062 60 251 + 192 Gaps:17 71.75 269 49.74 6e-52 uncharacterized LOC103959062
blastp_kegg lcl|pop:POPTR_0005s16920g 40 282 + 243 Gaps:19 92.61 257 39.50 5e-49 POPTRDRAFT_559123 hypothetical protein
blastp_kegg lcl|gmx:100816505 51 282 + 232 Gaps:18 90.35 259 41.45 2e-48 uncharacterized LOC100816505
blastp_kegg lcl|cam:101514274 50 282 + 233 Gaps:4 91.24 251 40.17 3e-48 uncharacterized LOC101514274

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 30 280 251 PTHR31852:SF0 none none none
Phobius 109 134 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 108 108 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 135 282 148 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 159 253 95 PF03168 none Late embryogenesis abundant protein IPR004864
PANTHER 30 280 251 PTHR31852 none none none

1 Localization

Analysis Start End Length
TMHMM 110 132 22

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting