Protein : Qrob_P0018150.2 Q. robur
Protein Identifier  ? Qrob_P0018150.2 Organism . Name  Quercus robur
Score  17.9 Score Type  egn
Protein Description  (M=2) 2.5.1.20 - Rubber cis-polyprenylcistransferase. Code Enzyme  EC:2.5.1.20
Gene Prediction Quality  validated Protein length 

Sequence

Length: 293  
Kegg Orthology  K11778
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Protein Sequence Displayer

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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor).

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa019993mg 1 292 + 292 Gaps:4 100.00 290 58.62 1e-116 hypothetical protein
blastp_kegg lcl|pmum:103334495 1 292 + 292 Gaps:4 100.00 290 58.97 8e-116 dehydrodolichyl diphosphate synthase 6-like
blastp_kegg lcl|pper:PRUPE_ppa009495mg 1 292 + 292 Gaps:4 100.00 290 58.62 1e-115 hypothetical protein
blastp_kegg lcl|fve:101307740 1 292 + 292 Gaps:4 100.00 290 57.93 3e-115 dehydrodolichyl diphosphate synthase 6-like isoform 1
blastp_kegg lcl|fve:101313933 1 292 + 292 Gaps:4 100.00 290 57.93 6e-115 dehydrodolichyl diphosphate synthase 6-like isoform 1
blastp_kegg lcl|vvi:100854016 8 292 + 285 Gaps:20 97.79 271 66.04 2e-114 dehydrodolichyl diphosphate synthase 6-like
blastp_kegg lcl|vvi:100251570 1 291 + 291 Gaps:4 99.66 290 57.79 8e-111 dehydrodolichyl diphosphate synthase 6-like
blastp_kegg lcl|pmum:103323677 1 292 + 292 Gaps:7 77.27 374 56.06 9e-109 dehydrodolichyl diphosphate synthase 6-like
blastp_kegg lcl|cic:CICLE_v10030317mg 1 291 + 291 Gaps:4 99.66 292 58.42 1e-108 hypothetical protein
blastp_kegg lcl|cit:102610116 1 291 + 291 Gaps:4 99.66 292 58.42 1e-108 dehydrodolichyl diphosphate synthase 6-like
blastp_pdb 1f75_B 28 284 + 257 Gaps:31 93.17 249 33.19 7e-29 mol:protein length:249 UNDECAPRENYL PYROPHOSPHATE SYNTHETASE
blastp_pdb 1f75_A 28 284 + 257 Gaps:31 93.17 249 33.19 7e-29 mol:protein length:249 UNDECAPRENYL PYROPHOSPHATE SYNTHETASE
blastp_pdb 2vg0_B 33 279 + 247 Gaps:27 98.68 227 32.14 7e-26 mol:protein length:227 SHORT-CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHETAS
blastp_pdb 2vg0_A 33 279 + 247 Gaps:27 98.68 227 32.14 7e-26 mol:protein length:227 SHORT-CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHETAS
blastp_pdb 2vfw_B 33 279 + 247 Gaps:27 98.68 227 32.14 7e-26 mol:protein length:227 SHORT-CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHETAS
blastp_pdb 2vfw_A 33 279 + 247 Gaps:27 98.68 227 32.14 7e-26 mol:protein length:227 SHORT-CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHETAS
blastp_pdb 2vg1_B 33 279 + 247 Gaps:27 98.25 228 32.14 8e-26 mol:protein length:228 SHORT-CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHETAS
blastp_pdb 2vg1_A 33 279 + 247 Gaps:27 98.25 228 32.14 8e-26 mol:protein length:228 SHORT-CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHETAS
blastp_pdb 2vg4_D 33 278 + 246 Gaps:26 77.46 284 33.18 6e-24 mol:protein length:284 UNDECAPRENYL PYROPHOSPHATE SYNTHETASE
blastp_pdb 2vg4_C 33 278 + 246 Gaps:26 77.46 284 33.18 6e-24 mol:protein length:284 UNDECAPRENYL PYROPHOSPHATE SYNTHETASE
blastp_uniprot_sprot sp|Q8S2T1|DDPS6_ARATH 18 291 + 274 Gaps:5 91.86 295 58.30 1e-105 Dehydrodolichyl diphosphate synthase 6 OS Arabidopsis thaliana GN At2g17570 PE 2 SV 2
blastp_uniprot_sprot sp|Q8W3U4|HRT2_HEVBR 13 289 + 277 Gaps:8 94.72 284 55.39 1e-94 Rubber cis-polyprenyltransferase HRT2 OS Hevea brasiliensis GN HRT2 PE 1 SV 1
blastp_uniprot_sprot sp|Q8LAR7|DDPS8_ARATH 3 290 + 288 Gaps:22 97.79 272 47.37 2e-76 Dehydrodolichyl diphosphate synthase 8 OS Arabidopsis thaliana GN At5g60510 PE 2 SV 2
blastp_uniprot_sprot sp|Q8LED0|DDPS7_ARATH 4 290 + 287 Gaps:22 97.79 271 46.79 2e-75 Dehydrodolichyl diphosphate synthase 7 OS Arabidopsis thaliana GN At5g60500 PE 2 SV 1
blastp_uniprot_sprot sp|Q86SQ9|DHDDS_HUMAN 18 289 + 272 Gaps:23 74.77 333 42.17 1e-49 Dehydrodolichyl diphosphate synthase OS Homo sapiens GN DHDDS PE 1 SV 3
blastp_uniprot_sprot sp|Q99KU1|DHDDS_MOUSE 18 289 + 272 Gaps:23 74.77 333 40.96 2e-48 Dehydrodolichyl diphosphate synthase OS Mus musculus GN Dhdds PE 2 SV 1
blastp_uniprot_sprot sp|Q8RA26|ISPT_THETN 33 282 + 250 Gaps:26 90.69 247 42.86 1e-46 Isoprenyl transferase OS Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN uppS PE 3 SV 1
blastp_uniprot_sprot sp|P35196|RER2_YEAST 7 290 + 284 Gaps:46 90.91 286 36.15 1e-40 Dehydrodolichyl diphosphate synthase RER2 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN RER2 PE 1 SV 1
blastp_uniprot_sprot sp|Q819Y1|ISPT_BACCR 31 283 + 253 Gaps:27 87.60 258 41.15 3e-39 Isoprenyl transferase OS Bacillus cereus (strain ATCC 14579 / DSM 31) GN uppS PE 3 SV 1
blastp_uniprot_sprot sp|Q732P6|ISPT_BACC1 31 283 + 253 Gaps:37 87.60 258 40.27 1e-38 Isoprenyl transferase OS Bacillus cereus (strain ATCC 10987) GN uppS PE 3 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 3 182 180 PTHR10291:SF3 none none none
PANTHER 3 182 180 PTHR10291 none none IPR001441
Pfam 40 283 244 PF01255 none Putative undecaprenyl diphosphate synthase IPR001441
PANTHER 207 291 85 PTHR10291 none none IPR001441
SUPERFAMILY 30 280 251 SSF64005 none none IPR001441
PANTHER 207 291 85 PTHR10291:SF3 none none none
TIGRFAM 33 283 251 TIGR00055 none uppS: di-trans,poly-cis-decaprenylcistransferase IPR001441
Gene3D 19 282 264 G3DSA:3.40.1180.10 none none IPR001441

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting