Protein : Qrob_P0017620.2 Q. robur
Protein Identifier  ? Qrob_P0017620.2 Organism . Name  Quercus robur
Score  4.0 Score Type  egn
Protein Description  (M=315) PTHR23155:SF419 - LEUCINE-RICH REPEAT PROTEIN SOC-2 (PTHR23155:SF419) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1393  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_019941 2 1213 + 1212 Gaps:117 99.08 1194 47.17 0.0 LRR and NB-ARC domains-containing disease resistance protein putative
blastp_kegg lcl|tcc:TCM_019825 3 1213 + 1211 Gaps:129 99.05 1161 47.57 0.0 Cc-nbs-lrr resistance protein putative
blastp_kegg lcl|pop:POPTR_0014s00410g 1 1213 + 1213 Gaps:102 99.41 1188 47.67 0.0 Fom-2 family protein
blastp_kegg lcl|pmum:103331034 1 1211 + 1211 Gaps:157 94.67 1352 44.30 0.0 putative disease resistance protein RGA4
blastp_kegg lcl|pper:PRUPE_ppa026844mg 1 1211 + 1211 Gaps:157 99.22 1290 44.14 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s00510g 20 1213 + 1194 Gaps:105 99.14 1169 47.97 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s00760g 1 1213 + 1213 Gaps:93 100.00 1176 46.68 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s01230g 15 1213 + 1199 Gaps:96 99.23 1174 47.04 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s00680g 4 1213 + 1210 Gaps:115 99.83 1177 46.89 0.0 Fom-2 family protein
blastp_kegg lcl|mdm:103422752 13 1212 + 1200 Gaps:97 96.50 1257 44.68 0.0 putative disease resistance protein RGA4
blastp_uniprot_sprot sp|Q7XA40|RGA3_SOLBU 10 1213 + 1204 Gaps:152 99.40 992 43.51 0.0 Putative disease resistance protein RGA3 OS Solanum bulbocastanum GN RGA3 PE 2 SV 2
blastp_uniprot_sprot sp|Q7XBQ9|RGA2_SOLBU 6 1213 + 1208 Gaps:135 99.79 970 41.53 1e-172 Disease resistance protein RGA2 OS Solanum bulbocastanum GN RGA2 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XA39|RGA4_SOLBU 10 1213 + 1204 Gaps:136 99.49 988 42.32 1e-166 Putative disease resistance protein RGA4 OS Solanum bulbocastanum GN RGA4 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XA42|RGA1_SOLBU 10 1213 + 1204 Gaps:208 99.39 979 43.88 1e-163 Putative disease resistance protein RGA1 OS Solanum bulbocastanum GN RGA1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LRR4|R13L1_ARATH 33 1046 + 1014 Gaps:134 92.60 1054 34.84 3e-134 Putative disease resistance RPP13-like protein 1 OS Arabidopsis thaliana GN RPPL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LRR5|DRL21_ARATH 36 1213 + 1178 Gaps:169 83.71 1424 34.40 8e-114 Putative disease resistance protein At3g14460 OS Arabidopsis thaliana GN At3g14460 PE 3 SV 1
blastp_uniprot_sprot sp|P0C8S1|RP8L2_ARATH 3 914 + 912 Gaps:90 97.35 906 30.95 3e-73 Probable disease resistance RPP8-like protein 2 OS Arabidopsis thaliana GN RPP8L2 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FJB5|RP8L3_ARATH 3 912 + 910 Gaps:84 96.56 901 29.54 9e-70 Disease resistance RPP8-like protein 3 OS Arabidopsis thaliana GN RPP8L3 PE 2 SV 1
blastp_uniprot_sprot sp|Q38834|R13L4_ARATH 3 788 + 786 Gaps:80 88.97 852 29.02 1e-67 Disease resistance RPP13-like protein 4 OS Arabidopsis thaliana GN RPP13L4 PE 2 SV 2
blastp_uniprot_sprot sp|Q8W4J9|RPP8_ARATH 3 912 + 910 Gaps:103 96.81 908 30.15 8e-66 Disease resistance protein RPP8 OS Arabidopsis thaliana GN RPP8 PE 1 SV 2
rpsblast_cdd gnl|CDD|201512 188 458 + 271 Gaps:11 94.74 285 42.96 3e-66 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|178749 918 1201 + 284 Gaps:99 27.49 1153 37.22 6e-13 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_kog gnl|CDD|39857 14 923 + 910 Gaps:94 98.54 889 28.42 1e-102 KOG4658 KOG4658 KOG4658 Apoptotic ATPase [Signal transduction mechanisms].

27 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 894 1202 309 SSF52058 none none none
PANTHER 571 863 293 PTHR23155:SF419 none none none
Gene3D 172 341 170 G3DSA:3.40.50.300 none none IPR027417
Coils 126 147 22 Coil none none none
Gene3D 1104 1187 84 G3DSA:3.80.10.10 none none none
PANTHER 1 464 464 PTHR23155:SF419 none none none
PANTHER 961 984 24 PTHR23155:SF419 none none none
PANTHER 1004 1097 94 PTHR23155:SF419 none none none
PANTHER 1122 1384 263 PTHR23155:SF419 none none none
PANTHER 961 984 24 PTHR23155 none none none
Gene3D 759 1083 325 G3DSA:3.80.10.10 none none none
PANTHER 1 464 464 PTHR23155 none none none
PANTHER 571 863 293 PTHR23155 none none none
PANTHER 1004 1097 94 PTHR23155 none none none
SUPERFAMILY 751 983 233 SSF52058 none none none
SUPERFAMILY 480 515 36 SSF52058 none none none
SUPERFAMILY 556 687 132 SSF52058 none none none
Coils 36 57 22 Coil none none none
PANTHER 1122 1384 263 PTHR23155 none none none
Pfam 173 457 285 PF00931 none NB-ARC domain IPR002182
SUPERFAMILY 158 429 272 SSF52540 none none IPR027417
PRINTS 193 208 16 PR00364 none Disease resistance protein signature none
PRINTS 266 280 15 PR00364 none Disease resistance protein signature none
PRINTS 365 379 15 PR00364 none Disease resistance protein signature none
PRINTS 631 647 17 PR00364 none Disease resistance protein signature none
Gene3D 384 422 39 G3DSA:3.80.10.10 none none none
Gene3D 569 688 120 G3DSA:3.80.10.10 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting