Protein : Qrob_P0016730.2 Q. robur
Protein Identifier  ? Qrob_P0016730.2 Organism . Name  Quercus robur
Score  12.2 Score Type  egn
Protein Description  (M=1) KOG0929//KOG1848 - Guanine nucleotide exchange factor [Intracellular trafficking secretion and vesicular transport]. // Uncharacterized conserved protein [Function unknown]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1377  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103318561 21 1376 + 1356 Gaps:59 82.53 1666 79.42 0.0 protein MON2 homolog
blastp_kegg lcl|cic:CICLE_v10000022mg 18 1375 + 1358 Gaps:65 83.11 1652 78.37 0.0 hypothetical protein
blastp_kegg lcl|cit:102616955 18 1375 + 1358 Gaps:65 83.11 1652 78.37 0.0 protein MON2 homolog
blastp_kegg lcl|tcc:TCM_026422 1 1372 + 1372 Gaps:64 83.97 1653 77.16 0.0 ARM repeat superfamily protein
blastp_kegg lcl|mdm:103434139 21 1374 + 1354 Gaps:59 82.47 1660 78.16 0.0 protein MON2 homolog
blastp_kegg lcl|vvi:100264068 1 1376 + 1376 Gaps:81 83.97 1628 78.42 0.0 protein MON2 homolog
blastp_kegg lcl|pop:POPTR_0030s00330g 1 1376 + 1376 Gaps:63 84.22 1654 76.53 0.0 hypothetical protein
blastp_kegg lcl|gmx:100777257 21 1376 + 1356 Gaps:74 82.59 1637 78.25 0.0 protein MON2 homolog
blastp_kegg lcl|gmx:100818893 21 1376 + 1356 Gaps:70 82.63 1641 77.88 0.0 protein MON2 homolog
blastp_kegg lcl|fve:101302372 21 1376 + 1356 Gaps:82 82.35 1637 77.60 0.0 protein MON2 homolog
blastp_uniprot_sprot sp|Q9VLT1|MON2_DROME 38 1361 + 1324 Gaps:283 80.82 1684 26.30 1e-83 Protein MON2 homolog OS Drosophila melanogaster GN mon2 PE 2 SV 4
blastp_uniprot_sprot sp|Q29L43|MON2_DROPS 46 1361 + 1316 Gaps:290 80.31 1701 25.70 1e-81 Protein MON2 homolog OS Drosophila pseudoobscura pseudoobscura GN mon2 PE 3 SV 2
blastp_uniprot_sprot sp|Q80TL7|MON2_MOUSE 23 1352 + 1330 Gaps:208 68.92 1715 28.60 1e-72 Protein MON2 homolog OS Mus musculus GN Mon2 PE 2 SV 2
blastp_uniprot_sprot sp|Q6GP04|MON2_XENLA 48 1352 + 1305 Gaps:180 66.65 1721 27.99 1e-72 Protein MON2 homolog OS Xenopus laevis GN mon2 PE 2 SV 1
blastp_uniprot_sprot sp|Q7Z3U7|MON2_HUMAN 23 1352 + 1330 Gaps:140 60.07 1718 30.14 5e-60 Protein MON2 homolog OS Homo sapiens GN MON2 PE 1 SV 2
blastp_uniprot_sprot sp|Q19338|MON2_CAEEL 49 1345 + 1297 Gaps:173 53.04 1646 29.32 1e-29 Monensin-resistant homolog 2 OS Caenorhabditis elegans GN mon-2 PE 3 SV 2
blastp_uniprot_sprot sp|Q61SD1|MON2_CAEBR 49 1303 + 1255 Gaps:154 53.13 1645 29.18 2e-29 Protein MON2 homolog OS Caenorhabditis briggsae GN CBG06228 PE 3 SV 1
blastp_uniprot_sprot sp|F4IXW2|BIG5_ARATH 239 763 + 525 Gaps:129 26.34 1739 25.98 8e-18 Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS Arabidopsis thaliana GN BIG5 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LZX8|BIG2_ARATH 239 815 + 577 Gaps:110 32.29 1793 23.32 1e-13 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS Arabidopsis thaliana GN BIG2 PE 2 SV 1
blastp_uniprot_sprot sp|Q42510|GNOM_ARATH 250 766 + 517 Gaps:111 35.42 1451 24.32 8e-11 ARF guanine-nucleotide exchange factor GNOM OS Arabidopsis thaliana GN GN PE 1 SV 1
rpsblast_cdd gnl|CDD|178625 613 774 + 162 Gaps:17 8.48 1780 32.45 4e-10 PLN03076 PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF) Provisional.
rpsblast_cdd gnl|CDD|205070 21 128 + 108 Gaps:12 61.45 166 31.37 1e-09 pfam12783 Sec7_N Guanine nucleotide exchange factor in Golgi transport N-terminal. The full-length Sec7 functions proximally in the secretory pathway as a protein binding scaffold for the coat protein complexes COPII-COPI. The COPII-COPI-protein switch is necessary for maturation of the vesicular-tubular cluster VTC intermediate compartments for Golgi compartment biogenesis. This N-terminal domain however does not appear to be binding either of the COP or the ARF.
rpsblast_kog gnl|CDD|37059 13 1359 + 1347 Gaps:226 81.06 1610 27.82 0.0 KOG1848 KOG1848 KOG1848 Uncharacterized conserved protein [Function unknown].
rpsblast_kog gnl|CDD|36147 238 822 + 585 Gaps:110 35.34 1514 24.30 8e-12 KOG0929 KOG0929 KOG0929 Guanine nucleotide exchange factor [Intracellular trafficking secretion and vesicular transport].

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 1290 1362 73 SSF48371 none none IPR016024
SUPERFAMILY 575 603 29 SSF48371 none none IPR016024
SUPERFAMILY 794 998 205 SSF48371 none none IPR016024
SUPERFAMILY 1162 1244 83 SSF48371 none none IPR016024
SUPERFAMILY 701 758 58 SSF48371 none none IPR016024
SUPERFAMILY 23 145 123 SSF48371 none none IPR016024
SUPERFAMILY 694 737 44 SSF48371 none none IPR016024
SUPERFAMILY 240 597 358 SSF48371 none none IPR016024
PANTHER 21 665 645 PTHR10663 none none none
Pfam 20 128 109 PF12783 none Guanine nucleotide exchange factor in Golgi transport N-terminal none
PANTHER 21 665 645 PTHR10663:SF114 none none IPR026829
PANTHER 777 986 210 PTHR10663:SF114 none none IPR026829
PANTHER 1250 1373 124 PTHR10663:SF114 none none IPR026829
PANTHER 691 755 65 PTHR10663:SF114 none none IPR026829
PANTHER 777 986 210 PTHR10663 none none none
PANTHER 1250 1373 124 PTHR10663 none none none
PANTHER 691 755 65 PTHR10663 none none none

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting