Protein : Qrob_P0016380.2 Q. robur
Protein Identifier  ? Qrob_P0016380.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=81) PF13499 - EF-hand domain pair Gene Prediction Quality  validated
Protein length 

Sequence

Length: 160  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0005s05150g 1 130 + 130 none 100.00 130 55.38 1e-42 calcium-binding EF hand family protein
blastp_kegg lcl|tcc:TCM_026401 1 129 + 129 none 99.23 130 52.71 3e-40 Calcium-binding EF hand family protein putative
blastp_kegg lcl|rcu:RCOM_1428190 1 126 + 126 none 96.92 130 50.00 9e-40 calcium ion binding protein putative
blastp_kegg lcl|cic:CICLE_v10002832mg 1 129 + 129 none 99.23 130 55.04 2e-39 hypothetical protein
blastp_kegg lcl|cit:102607516 1 129 + 129 none 99.23 130 55.04 2e-39 hypothetical protein
blastp_kegg lcl|mdm:103419494 3 128 + 126 Gaps:1 89.44 142 52.76 5e-35 uncharacterized LOC103419494
blastp_kegg lcl|mdm:103434151 3 128 + 126 Gaps:1 89.44 142 52.76 5e-35 uncharacterized LOC103434151
blastp_kegg lcl|fve:101305683 6 126 + 121 Gaps:1 88.41 138 53.28 1e-34 uncharacterized protein LOC101305683
blastp_kegg lcl|mtr:MTR_1g081270 1 129 + 129 none 96.27 134 47.29 9e-34 hypothetical protein
blastp_kegg lcl|vvi:100252151 2 128 + 127 none 94.78 134 48.03 1e-33 uncharacterized LOC100252151

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 15 94 80 SSF47473 none none none
Pfam 27 92 66 PF13499 none EF-hand domain pair IPR011992
SMART 68 96 29 SM00054 none EF-hand, calcium binding motif IPR002048
SMART 24 52 29 SM00054 none EF-hand, calcium binding motif IPR002048
ProSiteProfiles 20 55 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Gene3D 21 97 77 G3DSA:1.10.238.10 none none IPR011992
ProSiteProfiles 64 99 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting