Protein : Qrob_P0016290.2 Q. robur
Protein Identifier  ? Qrob_P0016290.2 Organism . Name  Quercus robur
Score  18.2 Score Type  egn
Protein Description  (M=63) PF00931//PF01582 - NB-ARC domain // TIR domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1057  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100798893 1 842 + 842 Gaps:79 61.13 1464 41.23 3e-177 TMV resistance protein N-like
blastp_kegg lcl|pper:PRUPE_ppa025229mg 20 834 + 815 Gaps:78 97.42 853 42.36 7e-174 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa020421mg 14 821 + 808 Gaps:81 98.30 880 41.39 3e-173 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa000577mg 16 871 + 856 Gaps:92 83.93 1089 40.70 3e-172 hypothetical protein
blastp_kegg lcl|cam:101496656 16 865 + 850 Gaps:78 64.39 1404 40.71 1e-171 TMV resistance protein N-like
blastp_kegg lcl|pop:POPTR_0019s01640g 10 850 + 841 Gaps:63 95.37 885 42.77 8e-171 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa021703mg 20 845 + 826 Gaps:72 78.80 1104 40.80 1e-170 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa022914mg 20 839 + 820 Gaps:78 90.03 873 44.02 7e-170 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa017937mg 20 833 + 814 Gaps:98 98.43 894 40.80 3e-168 hypothetical protein
blastp_kegg lcl|cam:101490798 10 936 + 927 Gaps:104 66.87 1470 39.78 6e-168 TMV resistance protein N-like
blastp_pdb 3ozi_B 11 174 + 164 Gaps:5 80.88 204 41.21 7e-30 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 11 174 + 164 Gaps:5 80.88 204 41.21 7e-30 mol:protein length:204 L6tr
blastp_pdb 3jrn_A 18 188 + 171 Gaps:5 96.59 176 42.35 5e-28 mol:protein length:176 AT1G72930 protein
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 20 802 + 783 Gaps:75 69.93 1144 38.25 7e-126 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 11 877 + 867 Gaps:94 79.36 1095 33.26 3e-106 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 19 862 + 844 Gaps:123 89.93 1301 34.10 9e-98 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SZ67|WRK19_ARATH 7 800 + 794 Gaps:107 41.74 1895 31.35 3e-63 Probable WRKY transcription factor 19 OS Arabidopsis thaliana GN WRKY19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL92|WRK16_ARATH 29 831 + 803 Gaps:144 54.59 1372 29.77 9e-57 Probable WRKY transcription factor 16 OS Arabidopsis thaliana GN WRKY16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FKN7|DAR4_ARATH 4 831 + 828 Gaps:148 50.71 1613 28.97 2e-52 Protein DA1-related 4 OS Arabidopsis thaliana GN DAR4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9FH83|WRK52_ARATH 70 840 + 771 Gaps:156 55.51 1288 30.63 1e-46 Probable WRKY transcription factor 52 OS Arabidopsis thaliana GN WRKY52 PE 2 SV 3
blastp_uniprot_sprot sp|Q9SSN3|TIR_ARATH 18 188 + 171 Gaps:5 96.59 176 42.35 2e-27 Toll/interleukin-1 receptor-like protein OS Arabidopsis thaliana GN TIR PE 1 SV 1
blastp_uniprot_sprot sp|Q9SYC9|VAP14_ARATH 4 171 + 168 Gaps:10 29.77 571 37.06 1e-20 Vesicle-associated protein 1-4 OS Arabidopsis thaliana GN PVA14 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FHE9|P2A08_ARATH 10 158 + 149 Gaps:3 42.37 354 35.33 3e-20 Protein PHLOEM PROTEIN 2-LIKE A8 OS Arabidopsis thaliana GN PP2A8 PE 2 SV 1
rpsblast_cdd gnl|CDD|178749 10 814 + 805 Gaps:145 82.13 1153 34.85 1e-113 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201870 22 150 + 129 Gaps:5 99.26 135 49.25 2e-33 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|197607 19 156 + 138 Gaps:4 100.00 140 42.86 2e-31 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|201512 197 458 + 262 Gaps:26 91.93 285 27.86 9e-28 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|178736 21 153 + 133 Gaps:15 64.17 187 35.83 2e-12 PLN03194 PLN03194 putative disease resistance protein Provisional.
rpsblast_kog gnl|CDD|39857 170 805 + 636 Gaps:122 70.42 889 23.80 3e-30 KOG4658 KOG4658 KOG4658 Apoptotic ATPase [Signal transduction mechanisms].

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 177 452 276 SSF52540 none none IPR027417
Gene3D 553 823 271 G3DSA:3.80.10.10 none none none
PANTHER 10 716 707 PTHR11017:SF146 none none none
Pfam 22 150 129 PF01582 none TIR domain IPR000157
PRINTS 294 308 15 PR00364 none Disease resistance protein signature none
PRINTS 620 636 17 PR00364 none Disease resistance protein signature none
PRINTS 217 232 16 PR00364 none Disease resistance protein signature none
PRINTS 392 406 15 PR00364 none Disease resistance protein signature none
ProSiteProfiles 18 156 139 PS50104 none TIR domain profile. IPR000157
PANTHER 751 829 79 PTHR11017 none none none
PANTHER 845 862 18 PTHR11017 none none none
SUPERFAMILY 10 159 150 SSF52200 none none IPR000157
SMART 214 345 132 SM00382 none ATPases associated with a variety of cellular activities IPR003593
SMART 19 156 138 SM00255 none Toll - interleukin 1 - resistance IPR000157
PANTHER 10 716 707 PTHR11017 none none none
Gene3D 16 150 135 G3DSA:3.40.50.10140 none none IPR000157
SUPERFAMILY 552 829 278 SSF52058 none none none
SUPERFAMILY 429 527 99 SSF46785 none none none
PANTHER 751 829 79 PTHR11017:SF146 none none none
Gene3D 211 350 140 G3DSA:3.40.50.300 none none IPR027417
PANTHER 845 862 18 PTHR11017:SF146 none none none
Pfam 199 460 262 PF00931 none NB-ARC domain IPR002182

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting