Protein : Qrob_P0016280.2 Q. robur
Protein Identifier  ? Qrob_P0016280.2 Organism . Name  Quercus robur
Protein Description  (M=63) PF00931//PF01582 - NB-ARC domain // TIR domain Alias (in v1)  Qrob_P0004190.1
Gene Prediction Quality  manual_v2 Protein length 

Sequence

Length: 626  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa025229mg 20 624 + 605 Gaps:24 71.63 853 49.59 3e-174 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa000577mg 12 617 + 606 Gaps:23 56.11 1089 48.77 1e-173 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa020421mg 14 617 + 604 Gaps:15 68.52 880 49.25 3e-172 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa022914mg 20 624 + 605 Gaps:24 69.99 873 49.43 9e-172 hypothetical protein
blastp_kegg lcl|mdm:103435656 20 617 + 598 Gaps:16 95.22 628 47.66 4e-170 TMV resistance protein N-like
blastp_kegg lcl|pmum:103335496 20 624 + 605 Gaps:20 56.03 1087 49.59 1e-169 TMV resistance protein N-like
blastp_kegg lcl|pmum:103335518 20 617 + 598 Gaps:23 55.02 1096 48.59 2e-169 TMV resistance protein N-like
blastp_kegg lcl|pxb:103928023 1 625 + 625 Gaps:20 61.11 1026 47.37 8e-169 TMV resistance protein N-like
blastp_kegg lcl|pper:PRUPE_ppa021703mg 20 617 + 598 Gaps:19 54.62 1104 49.59 3e-168 hypothetical protein
blastp_kegg lcl|cam:101491438 12 624 + 613 Gaps:18 72.12 850 49.59 3e-168 TMV resistance protein N-like
blastp_pdb 3ozi_B 10 178 + 169 Gaps:4 83.82 204 42.69 1e-34 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 10 178 + 169 Gaps:4 83.82 204 42.69 1e-34 mol:protein length:204 L6tr
blastp_pdb 3jrn_A 18 188 + 171 Gaps:5 96.59 176 46.47 4e-34 mol:protein length:176 AT1G72930 protein
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 20 618 + 599 Gaps:35 52.27 1144 40.64 4e-117 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 12 618 + 607 Gaps:38 56.53 1095 36.51 1e-104 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 19 618 + 600 Gaps:31 45.58 1301 35.58 1e-96 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9FL92|WRK16_ARATH 29 618 + 590 Gaps:94 48.18 1372 32.38 2e-59 Probable WRKY transcription factor 16 OS Arabidopsis thaliana GN WRKY16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SZ67|WRK19_ARATH 7 618 + 612 Gaps:78 30.92 1895 33.28 5e-54 Probable WRKY transcription factor 19 OS Arabidopsis thaliana GN WRKY19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH83|WRK52_ARATH 29 618 + 590 Gaps:85 44.49 1288 31.76 9e-48 Probable WRKY transcription factor 52 OS Arabidopsis thaliana GN WRKY52 PE 2 SV 3
blastp_uniprot_sprot sp|Q9FKN7|DAR4_ARATH 29 617 + 589 Gaps:75 35.96 1613 30.00 8e-46 Protein DA1-related 4 OS Arabidopsis thaliana GN DAR4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SSN3|TIR_ARATH 18 188 + 171 Gaps:5 96.59 176 46.47 1e-33 Toll/interleukin-1 receptor-like protein OS Arabidopsis thaliana GN TIR PE 1 SV 1
blastp_uniprot_sprot sp|Q9FHE9|P2A08_ARATH 22 181 + 160 Gaps:5 46.05 354 37.42 1e-23 Protein PHLOEM PROTEIN 2-LIKE A8 OS Arabidopsis thaliana GN PP2A8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SYC9|VAP14_ARATH 19 158 + 140 Gaps:3 24.69 571 40.43 2e-21 Vesicle-associated protein 1-4 OS Arabidopsis thaliana GN PVA14 PE 2 SV 1
rpsblast_cdd gnl|CDD|178749 10 618 + 609 Gaps:39 53.95 1153 34.24 1e-96 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201870 22 150 + 129 Gaps:5 99.26 135 47.76 2e-33 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|197607 19 150 + 132 Gaps:4 95.71 140 46.27 1e-31 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|201512 197 459 + 263 Gaps:19 92.63 285 26.52 3e-25 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|178736 11 158 + 148 Gaps:15 72.19 187 31.85 2e-11 PLN03194 PLN03194 putative disease resistance protein Provisional.
rpsblast_cdd gnl|CDD|205852 22 119 + 98 Gaps:7 89.22 102 27.47 2e-10 pfam13676 TIR_2 TIR domain. This is a family of bacterial Toll-like receptors.
rpsblast_kog gnl|CDD|39857 171 612 + 442 Gaps:97 55.46 889 23.53 2e-21 KOG4658 KOG4658 KOG4658 Apoptotic ATPase [Signal transduction mechanisms].

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 10 625 616 PTHR11017:SF146 none none none
PANTHER 812 864 53 PTHR11017:SF146 none none none
SMART 214 377 164 SM00382 none ATPases associated with a variety of cellular activities IPR003593
PANTHER 670 746 77 PTHR11017 none none none
PANTHER 762 780 19 PTHR11017 none none none
Gene3D 16 134 119 G3DSA:3.40.50.10140 none none IPR000157
ProSiteProfiles 18 156 139 PS50104 none TIR domain profile. IPR000157
PANTHER 812 864 53 PTHR11017 none none none
Pfam 199 461 263 PF00931 none NB-ARC domain IPR002182
SUPERFAMILY 183 451 269 SSF52540 none none IPR027417
Gene3D 211 347 137 G3DSA:3.40.50.300 none none IPR027417
PANTHER 1022 1045 24 PTHR11017 none none none
PANTHER 1022 1045 24 PTHR11017:SF146 none none none
PANTHER 10 625 616 PTHR11017 none none none
Gene3D 644 851 208 G3DSA:3.80.10.10 none none none
Gene3D 559 599 41 G3DSA:3.80.10.10 none none none
SMART 19 156 138 SM00255 none Toll - interleukin 1 - resistance IPR000157
PANTHER 762 780 19 PTHR11017:SF146 none none none
Pfam 22 150 129 PF01582 none TIR domain IPR000157
PANTHER 670 746 77 PTHR11017:SF146 none none none
SUPERFAMILY 494 873 380 SSF52058 none none none
PRINTS 217 232 16 PR00364 none Disease resistance protein signature none
PRINTS 674 690 17 PR00364 none Disease resistance protein signature none
PRINTS 392 406 15 PR00364 none Disease resistance protein signature none
PRINTS 294 308 15 PR00364 none Disease resistance protein signature none
SUPERFAMILY 10 159 150 SSF52200 none none IPR000157

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting