Protein : Qrob_P0016160.2 Q. robur
Protein Identifier  ? Qrob_P0016160.2 Organism . Name  Quercus robur
Score  2.0 Score Type  egn
Protein Description  (M=35) KOG0444//KOG4658 - Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Apoptotic ATPase [Signal transduction mechanisms]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1215  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa020421mg 14 829 + 816 Gaps:120 97.73 880 42.09 1e-175 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa000577mg 12 846 + 835 Gaps:120 80.35 1089 41.71 6e-175 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa025229mg 20 802 + 783 Gaps:107 95.19 853 42.86 5e-172 hypothetical protein
blastp_kegg lcl|pxb:103928023 1 836 + 836 Gaps:106 77.78 1026 43.23 5e-172 TMV resistance protein N-like
blastp_kegg lcl|pop:POPTR_0019s01640g 10 828 + 819 Gaps:125 98.08 885 40.90 1e-171 hypothetical protein
blastp_kegg lcl|pmum:103335521 1 864 + 864 Gaps:125 87.08 1053 40.79 8e-171 TMV resistance protein N-like
blastp_kegg lcl|gmx:100798893 8 856 + 849 Gaps:120 60.86 1464 40.40 5e-170 TMV resistance protein N-like
blastp_kegg lcl|pmum:103335518 20 846 + 827 Gaps:133 80.47 1096 41.04 8e-170 TMV resistance protein N-like
blastp_kegg lcl|pper:PRUPE_ppa022914mg 20 832 + 813 Gaps:133 99.43 873 41.01 2e-169 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa021703mg 20 912 + 893 Gaps:160 84.51 1104 39.98 7e-169 hypothetical protein
blastp_pdb 3ozi_B 1 155 + 155 Gaps:28 87.75 204 36.87 6e-23 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 1 155 + 155 Gaps:28 87.75 204 36.87 6e-23 mol:protein length:204 L6tr
blastp_pdb 3jrn_A 18 165 + 148 Gaps:28 96.59 176 38.24 3e-17 mol:protein length:176 AT1G72930 protein
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 20 844 + 825 Gaps:110 73.16 1144 34.77 1e-110 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 11 939 + 929 Gaps:129 83.11 1095 31.32 1e-103 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 19 875 + 857 Gaps:208 89.62 1301 32.16 4e-87 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SZ67|WRK19_ARATH 7 813 + 807 Gaps:122 41.74 1895 31.86 4e-65 Probable WRKY transcription factor 19 OS Arabidopsis thaliana GN WRKY19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL92|WRK16_ARATH 29 844 + 816 Gaps:144 57.58 1372 28.48 6e-51 Probable WRKY transcription factor 16 OS Arabidopsis thaliana GN WRKY16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FKN7|DAR4_ARATH 8 927 + 920 Gaps:174 57.04 1613 27.83 9e-48 Protein DA1-related 4 OS Arabidopsis thaliana GN DAR4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9FH83|WRK52_ARATH 29 864 + 836 Gaps:144 63.35 1288 29.90 1e-47 Probable WRKY transcription factor 52 OS Arabidopsis thaliana GN WRKY52 PE 2 SV 3
blastp_uniprot_sprot sp|Q9LVT1|DRL39_ARATH 189 763 + 575 Gaps:138 92.94 623 24.87 1e-20 Putative disease resistance protein At5g47280 OS Arabidopsis thaliana GN At5g47280 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LZ25|DRL30_ARATH 193 764 + 572 Gaps:141 70.65 811 26.18 1e-18 Probable disease resistance protein At5g04720 OS Arabidopsis thaliana GN At5g04720 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SZA7|DRL29_ARATH 197 803 + 607 Gaps:143 73.04 816 27.18 2e-17 Probable disease resistance protein At4g33300 OS Arabidopsis thaliana GN At4g33300 PE 2 SV 3
rpsblast_cdd gnl|CDD|178749 10 825 + 816 Gaps:117 70.86 1153 32.56 1e-100 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201512 185 436 + 252 Gaps:19 88.77 285 27.67 8e-26 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|201870 22 127 + 106 Gaps:28 99.26 135 34.33 2e-18 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|197607 19 127 + 109 Gaps:27 95.71 140 35.82 3e-18 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|177728 621 826 + 206 Gaps:57 22.83 968 30.77 1e-06 PLN00113 PLN00113 leucine-rich repeat receptor-like protein kinase Provisional.
rpsblast_kog gnl|CDD|39857 148 829 + 682 Gaps:105 79.75 889 21.58 1e-28 KOG4658 KOG4658 KOG4658 Apoptotic ATPase [Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35665 537 801 + 265 Gaps:38 20.64 1255 23.17 2e-08 KOG0444 KOG0444 KOG0444 Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton].

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 19 133 115 SM00255 none Toll - interleukin 1 - resistance IPR000157
SUPERFAMILY 10 136 127 SSF52200 none none IPR000157
SMART 191 329 139 SM00382 none ATPases associated with a variety of cellular activities IPR003593
PANTHER 740 758 19 PTHR11017:SF146 none none none
Pfam 177 438 262 PF00931 none NB-ARC domain IPR002182
Pfam 81 127 47 PF01582 none TIR domain IPR000157
Pfam 22 78 57 PF01582 none TIR domain IPR000157
Gene3D 188 324 137 G3DSA:3.40.50.300 none none IPR027417
Gene3D 16 78 63 G3DSA:3.40.50.10140 none none IPR000157
PANTHER 740 758 19 PTHR11017 none none none
PANTHER 986 1008 23 PTHR11017 none none none
PANTHER 10 602 593 PTHR11017 none none none
ProSiteProfiles 18 78 61 PS50104 none TIR domain profile. IPR000157
PANTHER 10 602 593 PTHR11017:SF146 none none none
PANTHER 790 842 53 PTHR11017:SF146 none none none
PANTHER 648 724 77 PTHR11017:SF146 none none none
PANTHER 986 1008 23 PTHR11017:SF146 none none none
PANTHER 790 842 53 PTHR11017 none none none
PANTHER 648 724 77 PTHR11017 none none none
Gene3D 535 830 296 G3DSA:3.80.10.10 none none none
SUPERFAMILY 160 428 269 SSF52540 none none IPR027417
SUPERFAMILY 471 852 382 SSF52058 none none none
PRINTS 652 668 17 PR00364 none Disease resistance protein signature none
PRINTS 194 209 16 PR00364 none Disease resistance protein signature none
PRINTS 369 383 15 PR00364 none Disease resistance protein signature none
PRINTS 271 285 15 PR00364 none Disease resistance protein signature none

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting