Protein : Qrob_P0016140.2 Q. robur
Protein Identifier  ? Qrob_P0016140.2 Organism . Name  Quercus robur
Score  27.4 Score Type  egn
Protein Description  (M=35) KOG0444//KOG4658 - Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Apoptotic ATPase [Signal transduction mechanisms]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1273  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100798893 1 1025 + 1025 Gaps:124 70.29 1464 39.55 0.0 TMV resistance protein N-like
blastp_kegg lcl|pop:POPTR_0019s01640g 10 825 + 816 Gaps:80 98.08 885 42.40 2e-180 hypothetical protein
blastp_kegg lcl|cam:101496656 16 1035 + 1020 Gaps:123 72.72 1404 39.28 2e-180 TMV resistance protein N-like
blastp_kegg lcl|pper:PRUPE_ppa020421mg 14 826 + 813 Gaps:69 97.73 880 42.44 2e-180 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa000577mg 16 984 + 969 Gaps:124 94.12 1089 39.02 2e-176 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa021703mg 20 906 + 887 Gaps:68 84.51 1104 39.66 4e-173 hypothetical protein
blastp_kegg lcl|pmum:103335521 1 845 + 845 Gaps:75 84.71 1053 41.82 9e-172 TMV resistance protein N-like
blastp_kegg lcl|cam:101490798 10 985 + 976 Gaps:119 66.19 1470 40.18 2e-170 TMV resistance protein N-like
blastp_kegg lcl|pmum:103335518 20 984 + 965 Gaps:139 94.53 1096 38.22 4e-169 TMV resistance protein N-like
blastp_kegg lcl|pmum:103335496 20 953 + 934 Gaps:114 93.10 1087 38.44 1e-168 TMV resistance protein N-like
blastp_pdb 3ozi_B 20 174 + 155 Gaps:4 76.96 204 41.40 8e-30 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 20 174 + 155 Gaps:4 76.96 204 41.40 8e-30 mol:protein length:204 L6tr
blastp_pdb 3jrn_A 18 188 + 171 Gaps:5 96.59 176 42.35 4e-28 mol:protein length:176 AT1G72930 protein
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 20 765 + 746 Gaps:56 66.08 1144 39.55 2e-127 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 11 930 + 920 Gaps:103 82.83 1095 33.19 5e-107 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 19 841 + 823 Gaps:145 85.86 1301 35.81 9e-101 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SZ67|WRK19_ARATH 7 835 + 829 Gaps:99 43.69 1895 30.56 7e-64 Probable WRKY transcription factor 19 OS Arabidopsis thaliana GN WRKY19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL92|WRK16_ARATH 29 841 + 813 Gaps:147 57.58 1372 30.00 2e-55 Probable WRKY transcription factor 16 OS Arabidopsis thaliana GN WRKY16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FKN7|DAR4_ARATH 39 1062 + 1024 Gaps:191 63.79 1613 28.86 7e-54 Protein DA1-related 4 OS Arabidopsis thaliana GN DAR4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9FH83|WRK52_ARATH 70 861 + 792 Gaps:150 60.25 1288 30.15 3e-48 Probable WRKY transcription factor 52 OS Arabidopsis thaliana GN WRKY52 PE 2 SV 3
blastp_uniprot_sprot sp|Q9SSN3|TIR_ARATH 18 188 + 171 Gaps:5 96.59 176 42.35 1e-27 Toll/interleukin-1 receptor-like protein OS Arabidopsis thaliana GN TIR PE 1 SV 1
blastp_uniprot_sprot sp|Q9SYC9|VAP14_ARATH 19 171 + 153 Gaps:7 26.62 571 38.82 9e-21 Vesicle-associated protein 1-4 OS Arabidopsis thaliana GN PVA14 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FHE9|P2A08_ARATH 10 158 + 149 Gaps:3 42.37 354 35.33 3e-20 Protein PHLOEM PROTEIN 2-LIKE A8 OS Arabidopsis thaliana GN PP2A8 PE 2 SV 1
rpsblast_cdd gnl|CDD|178749 10 824 + 815 Gaps:99 82.13 1153 34.95 1e-117 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201870 22 150 + 129 Gaps:5 99.26 135 50.00 3e-34 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|197607 19 156 + 138 Gaps:4 100.00 140 42.86 7e-32 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|201512 197 458 + 262 Gaps:18 91.93 285 28.63 2e-28 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|178736 21 153 + 133 Gaps:15 64.17 187 35.83 2e-12 PLN03194 PLN03194 putative disease resistance protein Provisional.
rpsblast_cdd gnl|CDD|205852 22 119 + 98 Gaps:7 89.22 102 25.27 8e-07 pfam13676 TIR_2 TIR domain. This is a family of bacterial Toll-like receptors.
rpsblast_kog gnl|CDD|39857 170 822 + 653 Gaps:125 73.79 889 22.71 3e-31 KOG4658 KOG4658 KOG4658 Apoptotic ATPase [Signal transduction mechanisms].

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 19 156 138 SM00255 none Toll - interleukin 1 - resistance IPR000157
Gene3D 17 150 134 G3DSA:3.40.50.10140 none none IPR000157
SUPERFAMILY 499 514 16 SSF52058 none none none
SUPERFAMILY 558 828 271 SSF52058 none none none
ProSiteProfiles 18 156 139 PS50104 none TIR domain profile. IPR000157
PANTHER 10 721 712 PTHR11017 none none none
SUPERFAMILY 177 452 276 SSF52540 none none IPR027417
PANTHER 737 755 19 PTHR11017:SF146 none none none
PANTHER 10 721 712 PTHR11017:SF146 none none none
PANTHER 998 1021 24 PTHR11017 none none none
PANTHER 737 755 19 PTHR11017 none none none
Gene3D 211 344 134 G3DSA:3.40.50.300 none none IPR027417
SUPERFAMILY 10 159 150 SSF52200 none none IPR000157
PANTHER 787 839 53 PTHR11017 none none none
PRINTS 392 406 15 PR00364 none Disease resistance protein signature none
PRINTS 217 232 16 PR00364 none Disease resistance protein signature none
PRINTS 625 641 17 PR00364 none Disease resistance protein signature none
PRINTS 294 308 15 PR00364 none Disease resistance protein signature none
Pfam 199 460 262 PF00931 none NB-ARC domain IPR002182
PANTHER 787 839 53 PTHR11017:SF146 none none none
PANTHER 998 1021 24 PTHR11017:SF146 none none none
Gene3D 577 824 248 G3DSA:3.80.10.10 none none none
Gene3D 431 471 41 G3DSA:3.40.50.300 none none IPR027417
Pfam 22 150 129 PF01582 none TIR domain IPR000157

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting