Protein : Qrob_P0015950.2 Q. robur
Protein Identifier  ? Qrob_P0015950.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR10438//PTHR10438:SF223 - THIOREDOXIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 100  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015035 protein disulfide oxidoreductase activity Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
GO:0006662 glycerol ether metabolic process The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100258911 5 97 + 93 none 52.84 176 90.32 1e-54 PITH domain-containing protein At3g04780-like
blastp_kegg lcl|tcc:TCM_026378 5 97 + 93 none 52.54 177 90.32 9e-54 PITH domain-containing protein
blastp_kegg lcl|rcu:RCOM_1427670 5 97 + 93 none 52.84 176 88.17 9e-54 hypothetical protein
blastp_kegg lcl|cam:101497179 5 97 + 93 none 52.84 176 88.17 7e-53 PITH domain-containing protein At3g04780-like
blastp_kegg lcl|cic:CICLE_v10002653mg 5 98 + 94 none 53.11 177 86.17 1e-52 hypothetical protein
blastp_kegg lcl|cit:102631443 5 98 + 94 none 53.11 177 86.17 1e-52 PITH domain-containing protein At3g04780-like
blastp_kegg lcl|pop:POPTR_0013s03710g 5 97 + 93 none 52.84 176 88.17 1e-52 POPTRDRAFT_729810 hypothetical protein
blastp_kegg lcl|pop:POPTR_0005s05370g 5 97 + 93 none 52.84 176 88.17 7e-52 hypothetical protein
blastp_kegg lcl|crb:CARUB_v10014759mg 5 97 + 93 none 52.84 176 86.02 2e-51 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_477747 5 97 + 93 none 52.84 176 86.02 3e-51 hypothetical protein
blastp_pdb 1xoy_A 5 82 + 78 none 48.45 161 82.05 6e-41 mol:protein length:161 hypothetical protein At3g04780.1
blastp_pdb 1wwy_A 5 92 + 88 Gaps:2 52.63 171 36.67 2e-12 mol:protein length:171 Thioredoxin-like protein 1
blastp_uniprot_sprot sp|Q9SQZ9|PITH1_ARATH 5 97 + 93 none 52.84 176 84.95 9e-52 PITH domain-containing protein At3g04780 OS Arabidopsis thaliana GN At3g04780 PE 1 SV 2
blastp_uniprot_sprot sp|O43396|TXNL1_HUMAN 5 94 + 90 Gaps:2 31.83 289 35.87 4e-12 Thioredoxin-like protein 1 OS Homo sapiens GN TXNL1 PE 1 SV 3
blastp_uniprot_sprot sp|Q8CDN6|TXNL1_MOUSE 5 94 + 90 Gaps:2 31.83 289 34.78 1e-11 Thioredoxin-like protein 1 OS Mus musculus GN Txnl1 PE 2 SV 3
blastp_uniprot_sprot sp|Q920J4|TXNL1_RAT 5 94 + 90 Gaps:2 31.83 289 34.78 1e-11 Thioredoxin-like protein 1 OS Rattus norvegicus GN Txnl1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9USR1|TXL1_SCHPO 3 95 + 93 Gaps:3 33.10 290 32.29 5e-09 Thioredoxin-like protein 1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN txl1 PE 4 SV 1
rpsblast_cdd gnl|CDD|203406 5 82 + 78 Gaps:1 52.32 151 43.04 8e-23 pfam06201 PITH PITH domain. This family was formerly known as DUF1000. The full-length Txnl1 protein which is a probable component of the 26S proteasome uses its C-terminal PITH domain to associate specifically with the 26S proteasome. PITH derives from proteasome-interacting thioredoxin domain.
rpsblast_kog gnl|CDD|36126 5 98 + 94 Gaps:1 32.99 288 45.26 2e-27 KOG0908 KOG0908 KOG0908 Thioredoxin-like protein [Posttranslational modification protein turnover chaperones].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 5 65 61 PTHR10438 none none IPR005746
PANTHER 5 65 61 PTHR10438:SF223 none none none
Gene3D 5 97 93 G3DSA:2.60.120.470 none none IPR010400
ProSiteProfiles 1 98 98 PS51532 none PITH domain profile. IPR010400
SUPERFAMILY 4 81 78 SSF49785 none none IPR008979
Pfam 5 81 77 PF06201 none PITH domain IPR010400

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting