Protein : Qrob_P0015940.2 Q. robur
Protein Identifier  ? Qrob_P0015940.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) KOG1730 - Thioredoxin-like protein [Posttranslational modification protein turnover chaperones]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 95  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015035 protein disulfide oxidoreductase activity Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
GO:0006662 glycerol ether metabolic process The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103318625 1 84 + 84 none 47.46 177 90.48 1e-47 PITH domain-containing protein At3g04780
blastp_kegg lcl|pper:PRUPE_ppa012265mg 1 84 + 84 none 47.46 177 90.48 1e-47 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1427670 1 84 + 84 none 47.73 176 86.90 2e-46 hypothetical protein
blastp_kegg lcl|mdm:103434158 1 84 + 84 none 47.46 177 86.90 2e-46 PITH domain-containing protein At3g04780-like
blastp_kegg lcl|gmx:100305857 1 84 + 84 none 47.73 176 83.33 1e-45 uncharacterized LOC100305857
blastp_kegg lcl|mdm:103451021 1 84 + 84 none 47.46 177 84.52 1e-45 PITH domain-containing protein At3g04780-like
blastp_kegg lcl|pxb:103954418 1 84 + 84 none 47.46 177 84.52 3e-45 PITH domain-containing protein At3g04780
blastp_kegg lcl|vvi:100258911 1 84 + 84 none 47.73 176 85.71 4e-45 PITH domain-containing protein At3g04780-like
blastp_kegg lcl|fve:101300634 1 84 + 84 none 47.46 177 85.71 6e-45 PITH domain-containing protein At3g04780-like
blastp_kegg lcl|tcc:TCM_026378 4 84 + 81 none 45.76 177 86.42 9e-45 PITH domain-containing protein
blastp_pdb 1xoy_A 2 84 + 83 none 51.55 161 84.34 1e-45 mol:protein length:161 hypothetical protein At3g04780.1
blastp_pdb 1wwy_A 14 81 + 68 Gaps:5 36.84 171 47.62 1e-11 mol:protein length:171 Thioredoxin-like protein 1
blastp_uniprot_sprot sp|Q9SQZ9|PITH1_ARATH 1 84 + 84 none 47.73 176 84.52 6e-46 PITH domain-containing protein At3g04780 OS Arabidopsis thaliana GN At3g04780 PE 1 SV 2
blastp_uniprot_sprot sp|O43396|TXNL1_HUMAN 9 81 + 73 Gaps:5 23.53 289 45.59 2e-10 Thioredoxin-like protein 1 OS Homo sapiens GN TXNL1 PE 1 SV 3
blastp_uniprot_sprot sp|Q8CDN6|TXNL1_MOUSE 2 81 + 80 Gaps:6 25.61 289 45.95 4e-10 Thioredoxin-like protein 1 OS Mus musculus GN Txnl1 PE 2 SV 3
blastp_uniprot_sprot sp|Q920J4|TXNL1_RAT 9 81 + 73 Gaps:5 23.53 289 45.59 7e-10 Thioredoxin-like protein 1 OS Rattus norvegicus GN Txnl1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9USR1|TXL1_SCHPO 3 92 + 90 Gaps:4 29.66 290 39.53 1e-09 Thioredoxin-like protein 1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN txl1 PE 4 SV 1
blastp_uniprot_sprot sp|Q9VK68|PITH1_DROME 20 83 + 64 Gaps:1 30.81 211 44.62 3e-07 PITH domain-containing protein CG6153 OS Drosophila melanogaster GN CG6153 PE 2 SV 1
blastp_uniprot_sprot sp|Q29L80|PITH1_DROPS 20 91 + 72 Gaps:1 34.60 211 39.73 2e-06 PITH domain-containing protein GA19395 OS Drosophila pseudoobscura pseudoobscura GN GA19395 PE 3 SV 1
blastp_uniprot_sprot sp|Q6NYX8|PITH1_DANRE 13 83 + 71 Gaps:1 34.29 210 38.89 8e-06 PITH domain-containing protein 1 OS Danio rerio GN pithd1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9GZP4|PITH1_HUMAN 20 91 + 72 Gaps:1 34.60 211 39.73 9e-06 PITH domain-containing protein 1 OS Homo sapiens GN PITHD1 PE 1 SV 1
rpsblast_cdd gnl|CDD|203406 15 91 + 77 Gaps:2 52.32 151 48.10 4e-22 pfam06201 PITH PITH domain. This family was formerly known as DUF1000. The full-length Txnl1 protein which is a probable component of the 26S proteasome uses its C-terminal PITH domain to associate specifically with the 26S proteasome. PITH derives from proteasome-interacting thioredoxin domain.
rpsblast_kog gnl|CDD|36126 2 83 + 82 Gaps:5 27.43 288 51.90 2e-21 KOG0908 KOG0908 KOG0908 Thioredoxin-like protein [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|36941 15 91 + 77 Gaps:1 37.86 206 39.74 2e-10 KOG1730 KOG1730 KOG1730 Thioredoxin-like protein [Posttranslational modification protein turnover chaperones].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 15 83 69 PF06201 none PITH domain IPR010400
PANTHER 6 84 79 PTHR10438 none none IPR005746
ProSiteProfiles 5 94 90 PS51532 none PITH domain profile. IPR010400
Gene3D 8 83 76 G3DSA:2.60.120.470 none none IPR010400
PANTHER 6 84 79 PTHR10438:SF223 none none none
SUPERFAMILY 5 82 78 SSF49785 none none IPR008979

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting