Protein : Qrob_P0015810.2 Q. robur
Protein Identifier  ? Qrob_P0015810.2 Organism . Name  Quercus robur
Score  67.0 Score Type  egn
Protein Description  (M=2) PF00931//PF01582//PF12776 - NB-ARC domain // TIR domain // Myb/SANT-like DNA-binding domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1714  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa000577mg 1 1454 + 1454 Gaps:95 93.85 1089 45.11 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa022914mg 1 1433 + 1433 Gaps:85 99.31 873 48.33 0.0 hypothetical protein
blastp_kegg lcl|pmum:103335518 1 1454 + 1454 Gaps:127 94.62 1096 44.07 0.0 TMV resistance protein N-like
blastp_kegg lcl|pper:PRUPE_ppa024831mg 1 1454 + 1454 Gaps:93 98.88 894 47.74 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa025229mg 1 1415 + 1415 Gaps:85 99.53 853 48.41 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa017937mg 1 1454 + 1454 Gaps:93 98.88 894 47.62 0.0 hypothetical protein
blastp_kegg lcl|cam:101496656 1 1455 + 1455 Gaps:53 62.32 1404 48.23 0.0 TMV resistance protein N-like
blastp_kegg lcl|pper:PRUPE_ppa020421mg 1 1436 + 1436 Gaps:59 97.61 880 48.43 0.0 hypothetical protein
blastp_kegg lcl|gmx:100798893 1 1455 + 1455 Gaps:55 59.70 1464 47.14 0.0 TMV resistance protein N-like
blastp_kegg lcl|pmum:103335496 1 1454 + 1454 Gaps:85 81.51 1087 47.40 0.0 TMV resistance protein N-like
blastp_pdb 3jrn_A 584 753 + 170 Gaps:8 95.45 176 44.64 6e-35 mol:protein length:176 AT1G72930 protein
blastp_pdb 3ozi_B 590 749 + 160 Gaps:3 78.92 204 42.86 7e-33 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 590 749 + 160 Gaps:3 78.92 204 42.86 7e-33 mol:protein length:204 L6tr
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 1 1452 + 1452 Gaps:133 79.28 1144 38.48 4e-150 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 18 1444 + 1427 Gaps:136 74.25 1095 36.90 3e-127 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 1 1452 + 1452 Gaps:201 85.01 1301 39.87 1e-110 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SZ67|WRK19_ARATH 1 1359 + 1359 Gaps:122 39.79 1895 34.22 4e-85 Probable WRKY transcription factor 19 OS Arabidopsis thaliana GN WRKY19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL92|WRK16_ARATH 16 1446 + 1431 Gaps:189 57.58 1372 33.92 4e-82 Probable WRKY transcription factor 16 OS Arabidopsis thaliana GN WRKY16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH83|WRK52_ARATH 1 1437 + 1437 Gaps:184 73.14 1288 31.95 5e-70 Probable WRKY transcription factor 52 OS Arabidopsis thaliana GN WRKY52 PE 2 SV 3
blastp_uniprot_sprot sp|Q9FKN7|DAR4_ARATH 18 1446 + 1429 Gaps:143 49.35 1613 33.17 7e-66 Protein DA1-related 4 OS Arabidopsis thaliana GN DAR4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SSN3|TIR_ARATH 584 753 + 170 Gaps:8 95.45 176 44.64 2e-34 Toll/interleukin-1 receptor-like protein OS Arabidopsis thaliana GN TIR PE 1 SV 1
blastp_uniprot_sprot sp|Q9FHE9|P2A08_ARATH 575 757 + 183 Gaps:6 51.69 354 32.79 5e-21 Protein PHLOEM PROTEIN 2-LIKE A8 OS Arabidopsis thaliana GN PP2A8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SYC9|VAP14_ARATH 590 721 + 132 Gaps:2 23.12 571 38.64 4e-20 Vesicle-associated protein 1-4 OS Arabidopsis thaliana GN PVA14 PE 2 SV 1
rpsblast_cdd gnl|CDD|178749 13 1472 + 1460 Gaps:142 81.53 1153 37.23 1e-136 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201512 777 1039 + 263 Gaps:19 94.74 285 28.52 4e-35 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|201870 592 721 + 130 Gaps:6 99.26 135 46.27 2e-32 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|197607 590 727 + 138 Gaps:3 99.29 140 42.45 1e-31 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|178736 591 729 + 139 Gaps:26 66.84 187 36.00 3e-11 PLN03194 PLN03194 putative disease resistance protein Provisional.
rpsblast_cdd gnl|CDD|205852 592 664 + 73 Gaps:2 69.61 102 28.17 5e-09 pfam13676 TIR_2 TIR domain. This is a family of bacterial Toll-like receptors.
rpsblast_cdd gnl|CDD|193252 491 562 + 72 Gaps:4 77.08 96 32.43 1e-07 pfam12776 Myb_DNA-bind_3 Myb/SANT-like DNA-binding domain. This presumed domain appears to be related to other Myb/SANT like DNA binding domains. In particular pfam10545 seems most related. This family is greatly expanded in plants and appears in several proteins annotated as transposon proteins.

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 24 280 257 G3DSA:3.80.10.10 none none none
Gene3D 1153 1428 276 G3DSA:3.80.10.10 none none none
SUPERFAMILY 2 302 301 SSF52058 none none none
SMART 589 727 139 SM00255 none Toll - interleukin 1 - resistance IPR000157
PRINTS 1218 1234 17 PR00364 none Disease resistance protein signature none
PRINTS 863 877 15 PR00364 none Disease resistance protein signature none
PRINTS 786 801 16 PR00364 none Disease resistance protein signature none
PRINTS 957 971 15 PR00364 none Disease resistance protein signature none
SUPERFAMILY 1116 1452 337 SSF52058 none none none
Pfam 493 561 69 PF12776 none Myb/SANT-like DNA-binding domain IPR024752
Pfam 592 722 131 PF01582 none TIR domain IPR000157
Pfam 772 1036 265 PF00931 none NB-ARC domain IPR002182
SUPERFAMILY 755 1016 262 SSF52540 none none IPR027417
Gene3D 586 721 136 G3DSA:3.40.50.10140 none none IPR000157
SUPERFAMILY 993 1098 106 SSF46785 none none none
PANTHER 1392 1446 55 PTHR11017 none none none
PANTHER 344 1312 969 PTHR11017 none none none
Gene3D 780 939 160 G3DSA:3.40.50.300 none none IPR027417
SUPERFAMILY 581 730 150 SSF52200 none none IPR000157
PANTHER 1392 1446 55 PTHR11017:SF146 none none none
PANTHER 344 1312 969 PTHR11017:SF146 none none none
ProSiteProfiles 588 727 140 PS50104 none TIR domain profile. IPR000157

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting