11 Blast
| Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
|---|---|---|---|---|---|---|---|---|---|---|---|
| blastp_kegg | lcl|tcc:TCM_015100 | 9 | 327 | + | 319 | Gaps:15 | 88.71 | 372 | 63.03 | 7e-130 | F-box family protein putative isoform 1 |
| blastp_kegg | lcl|sot:102584529 | 9 | 320 | + | 312 | Gaps:11 | 88.49 | 365 | 58.51 | 9e-125 | F-box protein At4g00755-like |
| blastp_kegg | lcl|sly:101266305 | 9 | 307 | + | 299 | Gaps:2 | 81.57 | 369 | 60.13 | 2e-124 | F-box protein At4g00755-like |
| blastp_kegg | lcl|gmx:100786763 | 9 | 323 | + | 315 | Gaps:16 | 87.90 | 372 | 58.72 | 7e-123 | F-box protein At4g00755-like |
| blastp_kegg | lcl|gmx:100788398 | 9 | 309 | + | 301 | Gaps:3 | 80.21 | 374 | 61.00 | 9e-123 | F-box protein At4g00755-like |
| blastp_kegg | lcl|vvi:100243554 | 9 | 311 | + | 303 | Gaps:2 | 82.34 | 368 | 59.08 | 2e-119 | F-box protein At4g00755-like |
| blastp_kegg | lcl|pvu:PHAVU_004G121200g | 9 | 316 | + | 308 | Gaps:15 | 86.68 | 368 | 55.49 | 7e-119 | hypothetical protein |
| blastp_kegg | lcl|rcu:RCOM_1613780 | 9 | 324 | + | 316 | Gaps:19 | 85.91 | 362 | 57.56 | 4e-109 | hypothetical protein |
| blastp_kegg | lcl|cmo:103504622 | 9 | 320 | + | 312 | Gaps:10 | 85.79 | 373 | 52.19 | 6e-108 | F-box protein At4g00755-like |
| blastp_kegg | lcl|pper:PRUPE_ppa006742mg | 9 | 300 | + | 292 | Gaps:10 | 72.04 | 397 | 57.34 | 6e-106 | hypothetical protein |
| blastp_uniprot_sprot | sp|Q8LG03|FB345_ARATH | 9 | 275 | + | 267 | Gaps:3 | 71.62 | 377 | 51.11 | 6e-80 | F-box protein At4g00755 OS Arabidopsis thaliana GN At4g00755 PE 2 SV 1 |
5 Domain Motifs
| Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
|---|---|---|---|---|---|---|---|
| Phobius | 16 | 328 | 313 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
| Phobius | 1 | 2 | 2 | SIGNAL_PEPTIDE_N_REGION | none | N-terminal region of a signal peptide. | none |
| Phobius | 1 | 15 | 15 | SIGNAL_PEPTIDE | none | Signal peptide region | none |
| Phobius | 11 | 15 | 5 | SIGNAL_PEPTIDE_C_REGION | none | C-terminal region of a signal peptide. | none |
| Phobius | 3 | 10 | 8 | SIGNAL_PEPTIDE_H_REGION | none | Hydrophobic region of a signal peptide. | none |
9 Qtllist
| Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
|---|---|---|---|---|---|---|---|---|---|---|
| Bourran1_2004_QTL4_peak_Bud_burst_A4 | Qrob_Chr09 | 9 | s_1BY6BQ_440 | s_1AOIKO_756 | 16,45 | 0 | 27,45 | lod | 4,5 | 10,6 |
| Bourran_2000_2002_QTL7_Delta.F | Qrob_Chr09 | 9 | v_5944_442 | s_1BA1PC_866 | 23.51 | 10,96 | 35,74 | lod | 4.1466 | 0.041 |
| Bourran2_2003_QTL11_peak_Bud_burst_3P | Qrob_Chr09 | 9 | s_1CGP2H_273 | v_15801_330 | 27,16 | 4,16 | 48,16 | lod | 2,3 | 5,1 |
| Bourran2_2003_QTL13_peak_Bud_burst_A4 | Qrob_Chr09 | 9 | s_1AP8MN_635 | s_1A3QQ_692 | 18,18 | 10,88 | 25,88 | lod | 3,4 | 7,2 |
| Bourran2_2004_QTL12_peak_Bud_burst_3P | Qrob_Chr09 | 9 | s_1BDO6G_250 | s_1A83AM_496 | 34,31 | 9,31 | 44,31 | lod | 3,6 | 7,6 |
| Bourran2_2004_QTL14_peak_Bud_burst_A4 | Qrob_Chr09 | 9 | s_1BY6BQ_440 | s_1AOIKO_756 | 16,83 | 10,33 | 22,33 | lod | 3,8 | 9 |
| Bourran2_2015_nEpis_A4 | Qrob_Chr09 | 9 | v_15847_485 | v_8329_369 | 34,94 | 34,88 | 37,45 | lod | 3.1 | 7 |
| Bourran2_2015_nSecLBD_A4 | Qrob_Chr09 | 9 | v_15847_485 | v_8329_369 | 35,81 | 34,88 | 37,45 | lod | 4.4 | 10.4 |
| PM_1999_QTL15_peak_Bud_burst_3P | Qrob_Chr09 | 9 | s_1CGP2H_273 | v_15801_330 | 27,16 | 9,16 | 47,16 | lod | 3,6 | 6,5 |
