Protein : Qrob_P0014290.2 Q. robur
Protein Identifier  ? Qrob_P0014290.2 Organism . Name  Quercus robur
Score  55.1 Score Type  egn
Protein Description  (M=3) PTHR31960:SF2 - F-BOX PROTEIN PP2-A11-RELATED (PTHR31960:SF2) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 287  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_015102 1 284 + 284 Gaps:2 100.00 282 77.30 6e-164 Phloem protein 2-A13
blastp_kegg lcl|cit:102622915 1 285 + 285 Gaps:4 97.92 289 73.50 6e-154 F-box protein PP2-A13-like
blastp_kegg lcl|cic:CICLE_v10005557mg 1 285 + 285 Gaps:4 97.92 289 73.14 9e-151 hypothetical protein
blastp_kegg lcl|pop:POPTR_0012s13670g 1 285 + 285 Gaps:1 99.65 285 69.72 6e-149 POPTRDRAFT_728611 hypothetical protein
blastp_kegg lcl|pmum:103333249 1 281 + 281 Gaps:7 98.27 289 74.30 9e-148 F-box protein PP2-A13
blastp_kegg lcl|rcu:RCOM_1496940 1 285 + 285 Gaps:4 99.65 286 70.88 3e-144 ATPP2-A13 putative
blastp_kegg lcl|pop:POPTR_0015s13620g 24 285 + 262 Gaps:1 91.32 288 72.24 5e-143 POPTRDRAFT_1102346 hypothetical protein
blastp_kegg lcl|vvi:100248692 1 286 + 286 Gaps:7 100.00 279 66.67 7e-143 F-box protein PP2-A13-like
blastp_kegg lcl|mdm:103420227 1 284 + 284 Gaps:3 99.31 289 69.34 1e-142 F-box protein PP2-A12-like
blastp_kegg lcl|gmx:100795463 24 285 + 262 Gaps:1 89.76 293 72.62 4e-142 F-box protein PP2-A13-like
blastp_uniprot_sprot sp|Q9LEX0|P2A13_ARATH 1 278 + 278 Gaps:3 96.90 290 62.28 7e-127 F-box protein PP2-A13 OS Arabidopsis thaliana GN PP2A13 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FJ80|P2A14_ARATH 1 284 + 284 Gaps:10 98.97 291 59.38 8e-123 F-box protein PP2-A14 OS Arabidopsis thaliana GN PP2A14 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LN77|P2A12_ARATH 1 285 + 285 Gaps:5 99.66 291 59.31 1e-120 F-box protein PP2-A12 OS Arabidopsis thaliana GN P2A12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CAN4|P2A11_ARATH 21 286 + 266 Gaps:1 92.39 289 57.68 1e-109 F-box protein PP2-A11 OS Arabidopsis thaliana GN PP2A11 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LF92|P2A15_ARATH 1 286 + 286 Gaps:17 98.33 300 52.54 3e-104 F-box protein PP2-A15 OS Arabidopsis thaliana GN PP2A15 PE 2 SV 1
blastp_uniprot_sprot sp|O80494|P2B15_ARATH 27 282 + 256 Gaps:55 97.92 289 26.50 1e-24 F-box protein PP2-B15 OS Arabidopsis thaliana GN PP2B15 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZVQ6|P2B10_ARATH 27 279 + 253 Gaps:20 93.75 272 29.41 2e-23 F-box protein PP2-B10 OS Arabidopsis thaliana GN PP2B10 PE 1 SV 1
blastp_uniprot_sprot sp|Q3E6P4|FB95_ARATH 8 278 + 271 Gaps:43 86.25 320 30.07 2e-22 F-box protein At2g02240 OS Arabidopsis thaliana GN At2g02240 PE 2 SV 1
blastp_uniprot_sprot sp|Q6NPT8|PP2B1_ARATH 13 166 + 154 Gaps:5 44.94 336 35.76 5e-21 F-box protein PP2-B1 OS Arabidopsis thaliana GN PP2B1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZVR5|PP2B2_ARATH 13 278 + 266 Gaps:47 87.42 310 29.15 1e-20 Putative F-box protein PP2-B2 OS Arabidopsis thaliana GN PP2B2 PE 4 SV 2
rpsblast_cdd gnl|CDD|206467 116 277 + 162 Gaps:20 100.00 154 41.56 1e-43 pfam14299 PP2 Phloem protein 2. Phloem protein 2 (PP2) is one of the most abundant and enigmatic proteins in the phloem sap. PP2 is translocated in the assimilate stream where its lectin activity or RNA-binding properties can exert effects over long distances.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 4 283 280 PTHR31960 none none none
Gene3D 20 66 47 G3DSA:1.20.1280.50 none none none
PANTHER 4 283 280 PTHR31960:SF2 none none none
ProSiteProfiles 21 67 47 PS50181 none F-box domain profile. IPR001810
SMART 27 66 40 SM00256 none A Receptor for Ubiquitination Targets IPR001810
SUPERFAMILY 10 98 89 SSF81383 none none IPR001810
Pfam 116 276 161 PF14299 none Phloem protein 2 IPR025886

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5

0 Targeting