1 GO Terms
| Identifier | Name | Description |
|---|---|---|
| GO:0005515 | protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
15 Blast
| Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
|---|---|---|---|---|---|---|---|---|---|---|---|
| blastp_kegg | lcl|tcc:TCM_015109 | 1 | 458 | + | 458 | Gaps:15 | 99.78 | 458 | 66.96 | 3e-177 | IQ-domain 24 putative |
| blastp_kegg | lcl|pop:POPTR_0012s13350g | 1 | 458 | + | 458 | Gaps:23 | 100.00 | 455 | 62.20 | 5e-160 | POPTRDRAFT_570467 hypothetical protein |
| blastp_kegg | lcl|pop:POPTR_0015s13300g | 1 | 458 | + | 458 | Gaps:23 | 100.00 | 451 | 62.75 | 2e-159 | POPTRDRAFT_575803 calmodulin-binding family protein |
| blastp_kegg | lcl|rcu:RCOM_1496740 | 1 | 458 | + | 458 | Gaps:27 | 100.00 | 473 | 63.21 | 1e-157 | hypothetical protein |
| blastp_kegg | lcl|pper:PRUPE_ppa004660mg | 1 | 458 | + | 458 | Gaps:49 | 100.00 | 497 | 59.15 | 1e-154 | hypothetical protein |
| blastp_kegg | lcl|pvu:PHAVU_004G120200g | 1 | 458 | + | 458 | Gaps:47 | 91.99 | 512 | 60.51 | 6e-144 | hypothetical protein |
| blastp_kegg | lcl|gmx:100785181 | 1 | 458 | + | 458 | Gaps:59 | 100.00 | 477 | 61.01 | 2e-143 | protein IQ-DOMAIN 14-like |
| blastp_kegg | lcl|cic:CICLE_v10004956mg | 1 | 458 | + | 458 | Gaps:56 | 100.00 | 450 | 60.89 | 1e-136 | hypothetical protein |
| blastp_kegg | lcl|cit:102623793 | 1 | 458 | + | 458 | Gaps:56 | 100.00 | 450 | 60.89 | 1e-136 | protein IQ-DOMAIN 14-like |
| blastp_kegg | lcl|mdm:103440323 | 1 | 458 | + | 458 | Gaps:29 | 100.00 | 469 | 59.70 | 1e-135 | protein IQ-DOMAIN 14-like |
| blastp_uniprot_sprot | sp|Q8LPG9|IQD14_ARATH | 96 | 167 | + | 72 | none | 10.78 | 668 | 45.83 | 1e-13 | Protein IQ-DOMAIN 14 OS Arabidopsis thaliana GN IQD14 PE 1 SV 1 |
| blastp_uniprot_sprot | sp|Q8L4D8|IQD31_ARATH | 100 | 160 | + | 61 | none | 10.39 | 587 | 57.38 | 1e-13 | Protein IQ-DOMAIN 31 OS Arabidopsis thaliana GN IQD31 PE 1 SV 1 |
| blastp_uniprot_sprot | sp|Q9FXI5|IQD32_ARATH | 100 | 160 | + | 61 | none | 7.68 | 794 | 52.46 | 2e-10 | Protein IQ-DOMAIN 32 OS Arabidopsis thaliana GN IQD32 PE 1 SV 3 |
| blastp_uniprot_sprot | sp|Q9SF32|IQD1_ARATH | 100 | 180 | + | 81 | none | 17.84 | 454 | 40.74 | 3e-10 | Protein IQ-DOMAIN 1 OS Arabidopsis thaliana GN IQD1 PE 1 SV 1 |
| rpsblast_cdd | gnl|CDD|205359 | 344 | 428 | + | 85 | Gaps:7 | 83.81 | 105 | 43.18 | 2e-13 | pfam13178 DUF4005 Protein of unknown function (DUF4005). This is a C-terminal region of plant IQ-containing putative calmodulin-binding proteins. |
12 Domain Motifs
| Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
|---|---|---|---|---|---|---|---|
| PANTHER | 47 | 241 | 195 | PTHR32295 | none | none | none |
| ProSiteProfiles | 123 | 150 | 28 | PS50096 | none | IQ motif profile. | IPR000048 |
| ProSiteProfiles | 99 | 127 | 29 | PS50096 | none | IQ motif profile. | IPR000048 |
| Pfam | 344 | 420 | 77 | PF13178 | none | Protein of unknown function (DUF4005) | IPR025064 |
| SUPERFAMILY | 89 | 146 | 58 | SSF52540 | none | none | IPR027417 |
| PANTHER | 259 | 458 | 200 | PTHR32295 | none | none | none |
| Pfam | 123 | 140 | 18 | PF00612 | none | IQ calmodulin-binding motif | IPR000048 |
| Pfam | 102 | 120 | 19 | PF00612 | none | IQ calmodulin-binding motif | IPR000048 |
| PANTHER | 259 | 458 | 200 | PTHR32295:SF11 | none | none | none |
| PANTHER | 47 | 241 | 195 | PTHR32295:SF11 | none | none | none |
| SMART | 121 | 142 | 22 | SM00015 | none | Short calmodulin-binding motif containing conserved Ile and Gln residues. | IPR000048 |
| SMART | 98 | 120 | 23 | SM00015 | none | Short calmodulin-binding motif containing conserved Ile and Gln residues. | IPR000048 |
9 Qtllist
| Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
|---|---|---|---|---|---|---|---|---|---|---|
| Bourran1_2004_QTL4_peak_Bud_burst_A4 | Qrob_Chr09 | 9 | s_1BY6BQ_440 | s_1AOIKO_756 | 16,45 | 0 | 27,45 | lod | 4,5 | 10,6 |
| Bourran_2000_2002_QTL7_Delta.F | Qrob_Chr09 | 9 | v_5944_442 | s_1BA1PC_866 | 23.51 | 10,96 | 35,74 | lod | 4.1466 | 0.041 |
| Bourran2_2003_QTL11_peak_Bud_burst_3P | Qrob_Chr09 | 9 | s_1CGP2H_273 | v_15801_330 | 27,16 | 4,16 | 48,16 | lod | 2,3 | 5,1 |
| Bourran2_2003_QTL13_peak_Bud_burst_A4 | Qrob_Chr09 | 9 | s_1AP8MN_635 | s_1A3QQ_692 | 18,18 | 10,88 | 25,88 | lod | 3,4 | 7,2 |
| Bourran2_2004_QTL12_peak_Bud_burst_3P | Qrob_Chr09 | 9 | s_1BDO6G_250 | s_1A83AM_496 | 34,31 | 9,31 | 44,31 | lod | 3,6 | 7,6 |
| Bourran2_2004_QTL14_peak_Bud_burst_A4 | Qrob_Chr09 | 9 | s_1BY6BQ_440 | s_1AOIKO_756 | 16,83 | 10,33 | 22,33 | lod | 3,8 | 9 |
| Bourran2_2015_nEpis_A4 | Qrob_Chr09 | 9 | v_15847_485 | v_8329_369 | 34,94 | 34,88 | 37,45 | lod | 3.1 | 7 |
| Bourran2_2015_nSecLBD_A4 | Qrob_Chr09 | 9 | v_15847_485 | v_8329_369 | 35,81 | 34,88 | 37,45 | lod | 4.4 | 10.4 |
| PM_1999_QTL15_peak_Bud_burst_3P | Qrob_Chr09 | 9 | s_1CGP2H_273 | v_15801_330 | 27,16 | 9,16 | 47,16 | lod | 3,6 | 6,5 |
