Protein : Qrob_P0013430.2 Q. robur
Protein Identifier  ? Qrob_P0013430.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=10) PF00560//PF00931//PF01582//PF13855 - Leucine Rich Repeat // NB-ARC domain // TIR domain // Leucine rich repeat Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1101  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa023967mg 10 1075 + 1066 Gaps:165 94.48 1142 42.72 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10023938mg 21 1075 + 1055 Gaps:196 89.39 1254 43.18 0.0 hypothetical protein
blastp_kegg lcl|cit:102616019 21 1032 + 1012 Gaps:203 75.31 1442 46.41 0.0 TMV resistance protein N-like
blastp_kegg lcl|cit:102621392 21 1075 + 1055 Gaps:165 91.95 1255 42.37 0.0 TMV resistance protein N-like
blastp_kegg lcl|cic:CICLE_v10024297mg 21 1031 + 1011 Gaps:224 91.34 1097 48.60 0.0 hypothetical protein
blastp_kegg lcl|mdm:103402160 19 1072 + 1054 Gaps:184 96.36 1127 41.62 0.0 HD8 TMV resistance protein N-like
blastp_kegg lcl|cic:CICLE_v10024735mg 21 866 + 846 Gaps:83 65.69 1189 49.17 0.0 hypothetical protein
blastp_kegg lcl|cit:102614449 20 851 + 832 Gaps:69 62.71 1239 47.62 0.0 TMV resistance protein N-like
blastp_kegg lcl|pper:PRUPE_ppa024688mg 1 1075 + 1075 Gaps:153 94.27 1065 42.53 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa024336mg 1 1075 + 1075 Gaps:205 93.56 1133 41.42 0.0 hypothetical protein
blastp_pdb 3ozi_B 6 164 + 159 Gaps:3 77.45 204 48.10 1e-39 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 6 164 + 159 Gaps:3 77.45 204 48.10 1e-39 mol:protein length:204 L6tr
blastp_pdb 3jrn_A 15 163 + 149 Gaps:2 83.52 176 51.02 9e-38 mol:protein length:176 AT1G72930 protein
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 19 1010 + 992 Gaps:126 90.56 1144 37.74 4e-159 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 13 869 + 857 Gaps:86 75.34 1095 34.42 4e-124 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 13 902 + 890 Gaps:215 83.09 1301 38.67 4e-107 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SZ67|WRK19_ARATH 9 860 + 852 Gaps:129 41.53 1895 31.89 7e-77 Probable WRKY transcription factor 19 OS Arabidopsis thaliana GN WRKY19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL92|WRK16_ARATH 215 888 + 674 Gaps:69 49.64 1372 32.75 9e-76 Probable WRKY transcription factor 16 OS Arabidopsis thaliana GN WRKY16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH83|WRK52_ARATH 215 881 + 667 Gaps:49 51.55 1288 32.08 7e-66 Probable WRKY transcription factor 52 OS Arabidopsis thaliana GN WRKY52 PE 2 SV 3
blastp_uniprot_sprot sp|Q9FKN7|DAR4_ARATH 215 888 + 674 Gaps:61 42.10 1613 30.49 6e-59 Protein DA1-related 4 OS Arabidopsis thaliana GN DAR4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SSN3|TIR_ARATH 15 163 + 149 Gaps:2 83.52 176 51.02 3e-37 Toll/interleukin-1 receptor-like protein OS Arabidopsis thaliana GN TIR PE 1 SV 1
blastp_uniprot_sprot sp|Q9FHE9|P2A08_ARATH 1 168 + 168 Gaps:10 44.63 354 35.44 2e-22 Protein PHLOEM PROTEIN 2-LIKE A8 OS Arabidopsis thaliana GN PP2A8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVT1|DRL39_ARATH 264 919 + 656 Gaps:138 96.63 623 29.07 2e-21 Putative disease resistance protein At5g47280 OS Arabidopsis thaliana GN At5g47280 PE 3 SV 1
rpsblast_cdd gnl|CDD|178749 12 883 + 872 Gaps:118 78.40 1153 38.27 1e-129 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201870 24 156 + 133 Gaps:2 100.00 135 48.89 5e-33 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|201512 244 512 + 269 Gaps:20 97.89 285 29.03 5e-32 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|197607 21 161 + 141 Gaps:5 100.00 140 44.29 8e-32 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|178736 10 127 + 118 Gaps:4 60.96 187 35.09 6e-13 PLN03194 PLN03194 putative disease resistance protein Provisional.
rpsblast_cdd gnl|CDD|205852 24 114 + 91 Gaps:7 82.35 102 28.57 1e-09 pfam13676 TIR_2 TIR domain. This is a family of bacterial Toll-like receptors.
rpsblast_cdd gnl|CDD|177728 689 840 + 152 Gaps:13 15.60 968 33.77 6e-09 PLN00113 PLN00113 leucine-rich repeat receptor-like protein kinase Provisional.

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 262 391 130 G3DSA:3.40.50.300 none none IPR027417
SMART 21 161 141 SM00255 none Toll - interleukin 1 - resistance IPR000157
Pfam 24 156 133 PF01582 none TIR domain IPR000157
PANTHER 214 898 685 PTHR11017:SF146 none none none
Pfam 785 842 58 PF13855 none Leucine rich repeat IPR001611
SUPERFAMILY 599 897 299 SSF52058 none none none
ProSiteProfiles 20 161 142 PS50104 none TIR domain profile. IPR000157
SUPERFAMILY 12 164 153 SSF52200 none none IPR000157
Pfam 260 512 253 PF00931 none NB-ARC domain IPR002182
Pfam 761 780 20 PF00560 none Leucine Rich Repeat IPR001611
Pfam 714 735 22 PF00560 none Leucine Rich Repeat IPR001611
PANTHER 214 898 685 PTHR11017 none none none
Gene3D 596 888 293 G3DSA:3.80.10.10 none none none
PANTHER 12 170 159 PTHR11017:SF146 none none none
PRINTS 433 447 15 PR00364 none Disease resistance protein signature none
PRINTS 264 279 16 PR00364 none Disease resistance protein signature none
PRINTS 340 354 15 PR00364 none Disease resistance protein signature none
PRINTS 805 821 17 PR00364 none Disease resistance protein signature none
SUPERFAMILY 237 491 255 SSF52540 none none IPR027417
Gene3D 19 144 126 G3DSA:3.40.50.10140 none none IPR000157
SUPERFAMILY 469 574 106 SSF46785 none none none
PANTHER 12 170 159 PTHR11017 none none none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 37   Mitochondrion 4 0.047 0.657 NON-PLANT 37