Protein : Qrob_P0013390.2 Q. robur
Protein Identifier  ? Qrob_P0013390.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG (PTHR12446:SF14) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 351  
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Sequence Feature Displayer

Protein Sequence Displayer

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0 Synonyms

0 GO Terms

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100249023 1 342 + 342 Gaps:25 60.64 592 50.70 3e-103 uncharacterized LOC100249023
blastp_kegg lcl|cit:102623928 1 342 + 342 Gaps:52 60.57 601 50.27 3e-102 protein tesmin/TSO1-like CXC 5-like
blastp_kegg lcl|cic:CICLE_v10007795mg 1 342 + 342 Gaps:52 60.57 601 50.27 4e-102 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1052210 1 347 + 347 Gaps:48 63.06 601 49.34 2e-101 transcription factor putative
blastp_kegg lcl|pvu:PHAVU_004G164700g 23 339 + 317 Gaps:15 56.43 560 53.48 2e-100 hypothetical protein
blastp_kegg lcl|gmx:100786353 16 339 + 324 Gaps:21 59.00 561 53.17 2e-98 protein tesmin/TSO1-like CXC 5-like
blastp_kegg lcl|gmx:100777698 22 339 + 318 Gaps:15 57.78 559 53.56 4e-98 protein tesmin/TSO1-like CXC 5-like
blastp_kegg lcl|gmx:100818116 25 339 + 315 Gaps:15 56.17 559 53.82 4e-98 protein tesmin/TSO1-like CXC 5-like
blastp_kegg lcl|pop:POPTR_0006s16340g 1 339 + 339 Gaps:43 69.75 519 47.79 8e-97 tesmin/TSO1-like CXC domain-containing family protein
blastp_kegg lcl|cmo:103497867 1 342 + 342 Gaps:37 62.88 590 46.36 3e-95 protein tesmin/TSO1-like CXC 5
blastp_uniprot_sprot sp|Q9SZD1|TCX5_ARATH 8 339 + 332 Gaps:67 61.53 603 47.44 4e-92 Protein tesmin/TSO1-like CXC 5 OS Arabidopsis thaliana GN TCX5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SL70|TCX6_ARATH 23 339 + 317 Gaps:23 54.64 571 47.76 7e-85 Protein tesmin/TSO1-like CXC 6 OS Arabidopsis thaliana GN TCX6 PE 1 SV 1
blastp_uniprot_sprot sp|F4JY84|TCX7_ARATH 1 336 + 336 Gaps:14 71.90 459 41.21 3e-69 Protein tesmin/TSO1-like CXC 7 OS Arabidopsis thaliana GN TCX7 PE 1 SV 1
blastp_uniprot_sprot sp|Q700D0|TCX8_ARATH 38 346 + 309 Gaps:59 71.20 368 42.75 1e-38 Protein tesmin/TSO1-like CXC 8 OS Arabidopsis thaliana GN TCX8 PE 1 SV 1
blastp_uniprot_sprot sp|A1Z9E2|LIN54_DROME 34 212 + 179 Gaps:20 18.42 950 43.43 2e-34 Protein lin-54 homolog OS Drosophila melanogaster GN mip120 PE 1 SV 1
blastp_uniprot_sprot sp|Q95QD7|LIN54_CAEEL 87 350 + 264 Gaps:32 55.17 435 36.67 4e-34 Protein lin-54 OS Caenorhabditis elegans GN lin-54 PE 1 SV 1
blastp_uniprot_sprot sp|F4JIF5|TCX2_ARATH 17 220 + 204 Gaps:17 28.04 674 40.21 1e-33 Protein tesmin/TSO1-like CXC 2 OS Arabidopsis thaliana GN TCX2 PE 1 SV 1
blastp_uniprot_sprot sp|Q8L548|TCX3_ARATH 91 216 + 126 Gaps:1 20.85 609 48.03 2e-32 Protein tesmin/TSO1-like CXC 3 OS Arabidopsis thaliana GN TCX3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LUI3|TSO1_ARATH 48 216 + 169 Gaps:8 23.45 695 40.49 2e-32 CRC domain-containing protein TSO1 OS Arabidopsis thaliana GN TSO1 PE 1 SV 1
blastp_uniprot_sprot sp|Q571G4|LIN54_MOUSE 80 259 + 180 Gaps:17 22.83 749 47.37 3e-32 Protein lin-54 homolog OS Mus musculus GN Lin54 PE 2 SV 2
rpsblast_cdd gnl|CDD|202712 88 210 + 123 Gaps:1 100.00 42 80.95 2e-13 pfam03638 CXC Tesmin/TSO1-like CXC domain. This family includes proteins that have two copies of a cysteine rich motif as follows: C-X-C-X4-C-X3-YC-X-C-X6-C-X3-C-X-C-X2-C. The family includes Tesmin and TSO1. This family is called a CXC domain in.
rpsblast_kog gnl|CDD|36386 83 216 + 134 Gaps:1 33.25 406 58.52 4e-43 KOG1171 KOG1171 KOG1171 Metallothionein-like protein [Inorganic ion transport and metabolism].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 56 331 276 PTHR12446:SF14 none none none
ProSiteProfiles 89 213 125 PS51634 none CRC domain profile. IPR005172
Pfam 89 127 39 PF03638 none Tesmin/TSO1-like CXC domain, cysteine-rich domain IPR005172
Pfam 173 212 40 PF03638 none Tesmin/TSO1-like CXC domain, cysteine-rich domain IPR005172
PANTHER 56 331 276 PTHR12446 none none IPR028307

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting