Protein : Qrob_P0013370.2 Q. robur
Protein Identifier  ? Qrob_P0013370.2 Organism . Name  Quercus robur
Score  93.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 109  
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0 Synonyms

0 GO Terms

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0003s05070g 1 104 + 104 Gaps:7 67.81 146 63.64 1e-33 POPTRDRAFT_645963 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa012979mg 1 104 + 104 Gaps:7 67.81 146 71.72 5e-32 hypothetical protein
blastp_kegg lcl|pop:POPTR_0001s18540g 1 104 + 104 Gaps:7 67.81 146 70.71 8e-32 POPTRDRAFT_815225 hypothetical protein
blastp_kegg lcl|brp:103871228 1 104 + 104 Gaps:6 67.59 145 60.20 6e-30 protein CURVATURE THYLAKOID 1C chloroplastic
blastp_kegg lcl|ath:AT1G52220 1 104 + 104 Gaps:6 69.68 155 53.70 1e-29 protein CURVATURE THYLAKOID 1C
blastp_kegg lcl|pmum:103327960 1 104 + 104 Gaps:8 68.03 147 70.00 1e-29 protein CURVATURE THYLAKOID 1C chloroplastic
blastp_kegg lcl|mdm:103443789 1 104 + 104 Gaps:11 67.81 146 66.67 2e-28 protein CURVATURE THYLAKOID 1C chloroplastic
blastp_kegg lcl|fve:101306048 1 104 + 104 Gaps:7 67.81 146 65.66 2e-28 thylakoid membrane phosphoprotein 14 kDa chloroplastic-like
blastp_kegg lcl|tcc:TCM_028770 1 104 + 104 Gaps:8 67.59 145 71.43 2e-28 Thylakoid membrane phosphoprotein 14 kDa
blastp_kegg lcl|aly:ARALYDRAFT_892226 1 104 + 104 Gaps:9 70.25 158 54.95 3e-28 hypothetical protein
blastp_uniprot_sprot sp|Q9M812|CUT1C_ARATH 1 104 + 104 Gaps:5 69.87 156 54.13 2e-33 Protein CURVATURE THYLAKOID 1C chloroplastic OS Arabidopsis thaliana GN CURT1C PE 1 SV 1

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 78 78 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 79 103 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 104 108 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

1 Localization

Analysis Start End Length
TMHMM 79 101 22

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 35   Mitochondrion 3 0.031 0.736 NON-PLANT 35