Protein : Qrob_P0013270.2 Q. robur
Protein Identifier  ? Qrob_P0013270.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=102) PF03140 - Plant protein of unknown function Gene Prediction Quality  validated
Protein length 

Sequence

Length: 432  
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0 Synonyms

0 GO Terms

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100253232 9 429 + 421 Gaps:48 91.00 478 42.07 7e-84 UPF0481 protein At3g47200-like
blastp_kegg lcl|vvi:100246366 17 429 + 413 Gaps:74 89.36 498 39.10 1e-73 UPF0481 protein At3g47200-like
blastp_kegg lcl|tcc:TCM_006050 2 424 + 423 Gaps:29 72.54 579 35.71 3e-63 hypothetical protein
blastp_kegg lcl|tcc:TCM_041494 16 429 + 414 Gaps:54 86.59 492 35.92 4e-62 UPF0481 protein putative
blastp_kegg lcl|rcu:RCOM_2161170 16 429 + 414 Gaps:24 86.77 461 36.25 1e-61 hypothetical protein
blastp_kegg lcl|gmx:102661472 15 420 + 406 Gaps:26 74.95 531 36.18 1e-61 UPF0481 protein At3g47200-like
blastp_kegg lcl|mdm:103449402 16 429 + 414 Gaps:34 95.24 420 36.75 1e-61 UPF0481 protein At3g47200-like
blastp_kegg lcl|pxb:103957754 20 419 + 400 Gaps:42 75.46 538 39.41 2e-61 UPF0481 protein At3g47200-like
blastp_kegg lcl|pxb:103957703 20 419 + 400 Gaps:42 75.46 538 39.41 2e-61 UPF0481 protein At3g47200-like
blastp_kegg lcl|pmum:103339851 16 426 + 411 Gaps:36 88.03 451 35.77 4e-61 UPF0481 protein At3g47200
blastp_uniprot_sprot sp|Q9SD53|Y3720_ARATH 16 428 + 413 Gaps:32 87.18 476 31.57 2e-42 UPF0481 protein At3g47200 OS Arabidopsis thaliana GN At3g47200 PE 1 SV 1
blastp_uniprot_sprot sp|P0C897|Y3264_ARATH 32 359 + 328 Gaps:39 56.14 529 31.65 3e-11 Putative UPF0481 protein At3g02645 OS Arabidopsis thaliana GN At3g02645 PE 3 SV 1
rpsblast_cdd gnl|CDD|190538 20 415 + 396 Gaps:27 99.48 387 36.88 2e-80 pfam03140 DUF247 Plant protein of unknown function. The function of the plant proteins constituting this family is unknown.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 15 429 415 PTHR31549:SF0 none none none
Phobius 403 427 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 402 402 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 15 429 415 PTHR31549 none none none
Coils 70 91 22 Coil none none none
Phobius 428 431 4 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 19 414 396 PF03140 none Plant protein of unknown function IPR004158

1 Localization

Analysis Start End Length
TMHMM 405 427 22

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting