Protein : Qrob_P0013240.2 Q. robur
Protein Identifier  ? Qrob_P0013240.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=102) PF03140 - Plant protein of unknown function Gene Prediction Quality  validated
Protein length 

Sequence

Length: 285  
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0 Synonyms

0 GO Terms

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100253232 7 267 + 261 Gaps:39 55.65 478 43.61 2e-50 UPF0481 protein At3g47200-like
blastp_kegg lcl|vvi:100246366 5 267 + 263 Gaps:31 54.22 498 42.22 8e-50 UPF0481 protein At3g47200-like
blastp_kegg lcl|gmx:102661472 1 268 + 268 Gaps:16 50.85 531 35.56 1e-37 UPF0481 protein At3g47200-like
blastp_kegg lcl|gmx:102663948 10 282 + 273 Gaps:11 54.80 500 33.94 3e-36 UPF0481 protein At3g47200-like
blastp_kegg lcl|pvu:PHAVU_009G240500g 16 282 + 267 Gaps:30 54.93 497 38.10 5e-36 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_004G072900g 16 277 + 262 Gaps:15 53.35 493 38.02 5e-36 hypothetical protein
blastp_kegg lcl|pop:POPTR_0007s13970g 7 267 + 261 Gaps:18 56.29 453 36.08 2e-35 POPTRDRAFT_802986 hypothetical protein
blastp_kegg lcl|tcc:TCM_006050 15 268 + 254 Gaps:25 45.42 579 33.46 1e-34 hypothetical protein
blastp_kegg lcl|tcc:TCM_022472 8 271 + 264 Gaps:16 54.78 471 35.66 5e-34 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10028367mg 7 267 + 261 Gaps:17 54.58 469 36.33 1e-33 hypothetical protein
blastp_uniprot_sprot sp|Q9SD53|Y3720_ARATH 5 267 + 263 Gaps:21 57.98 476 32.25 3e-28 UPF0481 protein At3g47200 OS Arabidopsis thaliana GN At3g47200 PE 1 SV 1
blastp_uniprot_sprot sp|P0C897|Y3264_ARATH 104 228 + 125 Gaps:8 22.50 529 33.61 6e-12 Putative UPF0481 protein At3g02645 OS Arabidopsis thaliana GN At3g02645 PE 3 SV 1
rpsblast_cdd gnl|CDD|190538 8 271 + 264 Gaps:23 67.96 387 35.36 1e-50 pfam03140 DUF247 Plant protein of unknown function. The function of the plant proteins constituting this family is unknown.

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 9 271 263 PTHR31549:SF0 none none none
Pfam 7 278 272 PF03140 none Plant protein of unknown function IPR004158
PANTHER 9 271 263 PTHR31549 none none none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting