Protein : Qrob_P0013190.2 Q. robur
Protein Identifier  ? Qrob_P0013190.2 Organism . Name  Quercus robur
Score  94.1 Score Type  egn
Protein Description  (M=6) PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 580  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005089 Rho guanyl-nucleotide exchange factor activity Stimulates the exchange of guanyl nucleotides associated with a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103327954 1 579 + 579 Gaps:51 100.00 532 77.44 0.0 rop guanine nucleotide exchange factor 12-like
blastp_kegg lcl|pper:PRUPE_ppa026953mg 1 579 + 579 Gaps:51 100.00 532 77.44 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1493800 1 579 + 579 Gaps:79 100.00 554 73.29 0.0 hypothetical protein
blastp_kegg lcl|mdm:103405454 1 579 + 579 Gaps:55 100.00 534 75.47 0.0 rop guanine nucleotide exchange factor 12
blastp_kegg lcl|pxb:103930428 1 579 + 579 Gaps:55 100.00 534 75.28 0.0 rop guanine nucleotide exchange factor 12-like
blastp_kegg lcl|pxb:103930447 1 579 + 579 Gaps:55 100.00 534 75.09 0.0 rop guanine nucleotide exchange factor 12-like
blastp_kegg lcl|pxb:103944858 1 579 + 579 Gaps:56 100.00 537 75.79 0.0 rop guanine nucleotide exchange factor 12
blastp_kegg lcl|mdm:103443794 1 579 + 579 Gaps:59 100.00 538 76.02 0.0 rop guanine nucleotide exchange factor 12-like
blastp_kegg lcl|cmo:103489945 1 579 + 579 Gaps:70 100.00 557 72.71 0.0 rop guanine nucleotide exchange factor 12-like
blastp_kegg lcl|cmo:103500592 1 579 + 579 Gaps:81 100.00 556 71.40 0.0 rop guanine nucleotide exchange factor 12-like
blastp_pdb 2wbl_B 71 459 + 389 Gaps:34 97.26 365 76.34 0.0 mol:protein length:365 RHO OF PLANTS GUANINE NUCLEOTIDE EXCHANGE FAC
blastp_pdb 2wbl_A 71 459 + 389 Gaps:34 97.26 365 76.34 0.0 mol:protein length:365 RHO OF PLANTS GUANINE NUCLEOTIDE EXCHANGE FAC
blastp_pdb 2nty_B 71 459 + 389 Gaps:34 97.26 365 76.34 0.0 mol:protein length:365 Emb|CAB41934.1
blastp_pdb 2nty_A 71 459 + 389 Gaps:34 97.26 365 76.34 0.0 mol:protein length:365 Emb|CAB41934.1
blastp_pdb 2ntx_B 71 459 + 389 Gaps:34 97.26 365 76.34 0.0 mol:protein length:365 Emb|CAB41934.1
blastp_pdb 2ntx_A 71 459 + 389 Gaps:34 97.26 365 76.34 0.0 mol:protein length:365 Emb|CAB41934.1
blastp_uniprot_sprot sp|Q9CA89|ROGFC_ARATH 1 579 + 579 Gaps:98 100.00 515 68.35 0.0 Rop guanine nucleotide exchange factor 12 OS Arabidopsis thaliana GN ROPGEF12 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M811|ROGFB_ARATH 5 579 + 575 Gaps:95 99.81 539 63.20 0.0 Rop guanine nucleotide exchange factor 11 OS Arabidopsis thaliana GN ROPGEF11 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LV40|ROGF8_ARATH 1 579 + 579 Gaps:92 100.00 523 62.72 0.0 Rho guanine nucleotide exchange factor 8 OS Arabidopsis thaliana GN ROPGEF8 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SVQ3|ROGF9_ARATH 17 579 + 563 Gaps:86 97.29 517 60.83 0.0 Rop guanine nucleotide exchange factor 9 OS Arabidopsis thaliana GN ROPGEF9 PE 1 SV 1
blastp_uniprot_sprot sp|F4J1G1|ROGFD_ARATH 1 577 + 577 Gaps:113 99.31 576 51.05 1e-167 Rop guanine nucleotide exchange factor 13 OS Arabidopsis thaliana GN ROPGEF13 PE 2 SV 1
blastp_uniprot_sprot sp|Q1KS66|ROGFA_ARATH 22 579 + 558 Gaps:69 100.00 493 56.39 6e-164 Rop guanine nucleotide exchange factor 10 OS Arabidopsis thaliana GN ROPGEF10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LZN0|ROGF7_ARATH 66 466 + 401 Gaps:53 69.60 546 51.84 2e-129 Rop guanine nucleotide exchange factor 7 OS Arabidopsis thaliana GN ROPGEF7 PE 1 SV 1
blastp_uniprot_sprot sp|Q93ZY2|ROGF1_ARATH 80 459 + 380 Gaps:53 66.24 548 53.99 1e-125 Rop guanine nucleotide exchange factor 1 OS Arabidopsis thaliana GN ROPGEF1 PE 1 SV 2
blastp_uniprot_sprot sp|F4K295|ROGF5_ARATH 77 463 + 387 Gaps:56 61.05 611 51.21 2e-121 Rop guanine nucleotide exchange factor 5 OS Arabidopsis thaliana GN ROPGEF5 PE 2 SV 1
blastp_uniprot_sprot sp|A4IJ27|ROGF3_ARATH 77 459 + 383 Gaps:55 77.38 473 51.09 1e-115 Rop guanine nucleotide exchange factor 3 OS Arabidopsis thaliana GN ROPGEF3 PE 2 SV 1
rpsblast_cdd gnl|CDD|190740 80 466 + 387 Gaps:40 99.17 360 68.63 0.0 pfam03759 PRONE PRONE (Plant-specific Rop nucleotide exchanger). This is a functional guanine exchange factor (GEF) of plant Rho GTPase.

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 71 469 399 PS51334 none PRONE domain profile. IPR005512
Pfam 77 289 213 PF03759 none PRONE (Plant-specific Rop nucleotide exchanger) IPR005512
Pfam 318 464 147 PF03759 none PRONE (Plant-specific Rop nucleotide exchanger) IPR005512

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting