Protein : Qrob_P0013120.2 Q. robur
Protein Identifier  ? Qrob_P0013120.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) PTHR31852:SF8 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN (PTHR31852:SF8) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 310  
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Protein Sequence Displayer

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0 Synonyms

0 GO Terms

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100261724 1 309 + 309 Gaps:3 100.00 310 81.61 0.0 uncharacterized LOC100261724
blastp_kegg lcl|mtr:MTR_2g101870 1 309 + 309 Gaps:2 100.00 309 77.35 4e-180 hypothetical protein
blastp_kegg lcl|tcc:TCM_028754 1 309 + 309 Gaps:7 99.67 305 80.26 4e-179 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10026158mg 1 309 + 309 Gaps:6 99.67 304 79.54 1e-178 hypothetical protein
blastp_kegg lcl|gmx:100818121 1 309 + 309 Gaps:1 99.68 309 79.55 9e-178 uncharacterized LOC100818121
blastp_kegg lcl|pvu:PHAVU_005G168300g 1 309 + 309 Gaps:2 99.68 310 75.73 7e-176 hypothetical protein
blastp_kegg lcl|sot:102588977 1 308 + 308 Gaps:3 99.68 310 77.35 6e-175 uncharacterized LOC102588977
blastp_kegg lcl|rcu:RCOM_1493970 1 309 + 309 Gaps:13 100.00 306 79.41 6e-174 hypothetical protein
blastp_kegg lcl|csv:101226433 1 309 + 309 Gaps:2 100.00 311 75.24 1e-172 uncharacterized LOC101226433
blastp_kegg lcl|csv:101220910 1 309 + 309 Gaps:2 100.00 311 75.24 1e-172 uncharacterized LOC101220910

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 145 309 165 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 123 144 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 187 283 97 PF03168 none Late embryogenesis abundant protein IPR004864
Phobius 1 122 122 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 3 308 306 PTHR31852:SF8 none none none
PANTHER 3 308 306 PTHR31852 none none none

1 Localization

Analysis Start End Length
TMHMM 123 145 22

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting