Protein : Qrob_P0013110.2 Q. robur
Protein Identifier  ? Qrob_P0013110.2 Organism . Name  Quercus robur
Protein Description  (M=1) PTHR18929:SF59 - PROTEIN DISULFIDE ISOMERASE-LIKE 1-5-RELATED (PTHR18929:SF59) Alias (in v1)  Qrob_P0365520.1
Code Enzyme  EC:5.3.4.1 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 539  
Kegg Orthology  K09580
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_028753 1 538 + 538 Gaps:4 99.81 537 76.31 0.0 PDI-like 1-5 isoform 2
blastp_kegg lcl|pmum:103327950 1 537 + 537 Gaps:2 98.53 543 75.14 0.0 protein disulfide isomerase-like 1-6
blastp_kegg lcl|pper:PRUPE_ppa003870mg 1 537 + 537 Gaps:2 98.53 543 74.95 0.0 hypothetical protein
blastp_kegg lcl|vvi:100265209 1 538 + 538 Gaps:3 100.00 537 72.07 0.0 protein disulfide isomerase-like 1-6
blastp_kegg lcl|pxb:103930424 1 538 + 538 none 100.00 538 72.49 0.0 protein disulfide isomerase-like 1-6
blastp_kegg lcl|mdm:103405456 1 538 + 538 none 100.00 538 72.12 0.0 protein disulfide isomerase-like 1-6
blastp_kegg lcl|rcu:RCOM_1493980 1 538 + 538 Gaps:3 100.00 537 71.51 0.0 protein disulfide isomerase putative (EC:2.4.1.119)
blastp_kegg lcl|gmx:100305460 5 538 + 534 Gaps:15 99.81 520 71.87 0.0 protein disulfide isomerase like protein
blastp_kegg lcl|cit:102614761 1 537 + 537 Gaps:7 97.67 557 69.49 0.0 protein disulfide isomerase-like 1-5-like
blastp_kegg lcl|gmx:100526845 50 538 + 489 Gaps:3 92.93 523 73.05 0.0 protein disulfide isomerase like protein
blastp_pdb 3f8u_C 82 520 + 439 Gaps:35 93.14 481 28.35 2e-43 mol:protein length:481 Protein disulfide-isomerase A3ERp57
blastp_pdb 3f8u_A 82 520 + 439 Gaps:35 93.14 481 28.35 2e-43 mol:protein length:481 Protein disulfide-isomerase A3ERp57
blastp_pdb 3uem_A 197 502 + 306 Gaps:14 84.76 361 29.74 1e-38 mol:protein length:361 Protein disulfide-isomerase
blastp_pdb 3boa_A 71 519 + 449 Gaps:43 90.08 504 25.55 2e-24 mol:protein length:504 Protein disulfide-isomerase
blastp_pdb 2b5e_A 71 519 + 449 Gaps:43 90.08 504 25.55 2e-24 mol:protein length:504 Protein disulfide-isomerase
blastp_pdb 2dmm_A 401 520 + 120 Gaps:4 83.10 142 35.59 3e-19 mol:protein length:142 Protein disulfide-isomerase A3
blastp_pdb 1mek_A 82 187 + 106 Gaps:3 90.83 120 38.53 6e-19 mol:protein length:120 PROTEIN DISULFIDE ISOMERASE
blastp_pdb 2dj3_A 420 536 + 117 Gaps:3 90.23 133 32.50 6e-18 mol:protein length:133 Protein disulfide-isomerase A4
blastp_pdb 2k18_A 197 411 + 215 Gaps:13 93.86 228 29.44 2e-17 mol:protein length:228 Protein disulfide-isomerase
blastp_pdb 2kp1_A 415 530 + 116 Gaps:8 97.52 121 31.36 2e-13 mol:protein length:121 Protein disulfide-isomerase
blastp_uniprot_sprot sp|Q66GQ3|PDI16_ARATH 1 538 + 538 Gaps:12 100.00 534 62.92 0.0 Protein disulfide isomerase-like 1-6 OS Arabidopsis thaliana GN PDIL1-6 PE 2 SV 1
blastp_uniprot_sprot sp|A3KPF5|PDI15_ARATH 5 538 + 534 Gaps:14 99.07 537 63.16 0.0 Protein disulfide isomerase-like 1-5 OS Arabidopsis thaliana GN PDIL1-5 PE 2 SV 1
blastp_uniprot_sprot sp|Q5WA72|PDI15_ORYSJ 75 538 + 464 Gaps:11 88.37 533 55.63 0.0 Protein disulfide isomerase-like 1-5 OS Oryza sativa subsp. japonica GN PDIL1-5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FF55|PDI14_ARATH 79 526 + 448 Gaps:3 74.87 597 32.89 9e-90 Protein disulfide isomerase-like 1-4 OS Arabidopsis thaliana GN PDIL1-4 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VX13|PDI13_ARATH 58 526 + 469 Gaps:6 81.00 579 32.41 5e-84 Protein disulfide isomerase-like 1-3 OS Arabidopsis thaliana GN PDIL1-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q67IX6|PDI14_ORYSJ 100 526 + 427 Gaps:4 76.20 563 34.03 7e-82 Protein disulfide isomerase-like 1-4 OS Oryza sativa subsp. japonica GN PDIL1-4 PE 2 SV 1
blastp_uniprot_sprot sp|P05307|PDIA1_BOVIN 82 502 + 421 Gaps:19 83.14 510 32.55 1e-67 Protein disulfide-isomerase OS Bos taurus GN P4HB PE 1 SV 1
blastp_uniprot_sprot sp|Q5R5B6|PDIA1_PONAB 82 502 + 421 Gaps:17 83.46 508 31.37 5e-67 Protein disulfide-isomerase OS Pongo abelii GN P4HB PE 2 SV 1
blastp_uniprot_sprot sp|Q2HWU2|PDIA1_MACFU 82 502 + 421 Gaps:19 83.14 510 32.31 6e-67 Protein disulfide-isomerase OS Macaca fuscata fuscata GN P4HB PE 2 SV 1
blastp_uniprot_sprot sp|P07237|PDIA1_HUMAN 82 502 + 421 Gaps:17 83.46 508 31.60 6e-67 Protein disulfide-isomerase OS Homo sapiens GN P4HB PE 1 SV 3

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 194 300 107 G3DSA:3.40.30.10 none none IPR012336
SUPERFAMILY 288 418 131 SSF52833 none none IPR012336
Phobius 1 29 29 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 193 301 109 SSF52833 none none IPR012336
Phobius 30 538 509 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 390 530 141 SSF52833 none none IPR012336
Coils 35 63 29 Coil none none none
PANTHER 74 537 464 PTHR18929:SF59 none none none
PANTHER 1 28 28 PTHR18929:SF59 none none none
PANTHER 74 537 464 PTHR18929 none none none
PANTHER 1 28 28 PTHR18929 none none none
Pfam 83 184 102 PF00085 none Thioredoxin IPR013766
Pfam 423 525 103 PF00085 none Thioredoxin IPR013766
SUPERFAMILY 78 187 110 SSF52833 none none IPR012336
Pfam 214 398 185 PF13848 none Thioredoxin-like domain none
Phobius 10 25 16 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSiteProfiles 400 528 129 PS51352 none Thioredoxin domain profile. IPR012336
Gene3D 78 186 109 G3DSA:3.40.30.10 none none IPR012336
Phobius 26 29 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 421 528 108 G3DSA:3.40.30.10 none none IPR012336
ProSiteProfiles 23 187 165 PS51352 none Thioredoxin domain profile. IPR012336

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 29 28
SignalP_EUK 1 29 28
TMHMM 7 26 19

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 29   Secretory pathway 1 0.968 0.068 NON-PLANT 29