Protein : Qrob_P0011060.2 Q. robur
Protein Identifier  ? Qrob_P0011060.2 Organism . Name  Quercus robur
Score  7.1 Score Type  egn
Protein Description  (M=85) PTHR23155//PTHR23155:SF445 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 925  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_008G014700g 1 914 + 914 Gaps:80 98.87 882 47.25 0.0 hypothetical protein
blastp_kegg lcl|gmx:100801950 1 915 + 915 Gaps:90 98.10 894 49.37 0.0 putative disease resistance RPP13-like protein 3-like
blastp_kegg lcl|gmx:100814688 1 912 + 912 Gaps:124 99.46 929 46.10 0.0 disease resistance protein RPP13-like
blastp_kegg lcl|gmx:100787796 1 921 + 921 Gaps:112 98.27 866 50.18 0.0 disease resistance protein RPP13-like
blastp_kegg lcl|gmx:100790719 1 912 + 912 Gaps:102 99.53 858 49.18 0.0 disease resistance protein RPP13-like
blastp_kegg lcl|pvu:PHAVU_011G014200g 1 910 + 910 Gaps:109 98.91 915 44.20 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_011G014300g 1 910 + 910 Gaps:118 95.46 947 43.25 0.0 hypothetical protein
blastp_kegg lcl|cam:101505907 1 912 + 912 Gaps:109 58.35 1592 44.03 0.0 probable disease resistance RPP8-like protein 2-like
blastp_kegg lcl|pvu:PHAVU_011G014500g 1 910 + 910 Gaps:106 95.66 876 45.35 0.0 hypothetical protein
blastp_kegg lcl|gmx:100780593 1 914 + 914 Gaps:108 99.55 896 42.15 0.0 putative disease resistance protein At1g50180-like
blastp_pdb 1z6t_D 311 565 + 255 Gaps:57 40.95 591 27.27 2e-07 mol:protein length:591 Apoptotic protease activating factor 1
blastp_pdb 1z6t_C 311 565 + 255 Gaps:57 40.95 591 27.27 2e-07 mol:protein length:591 Apoptotic protease activating factor 1
blastp_pdb 1z6t_B 311 565 + 255 Gaps:57 40.95 591 27.27 2e-07 mol:protein length:591 Apoptotic protease activating factor 1
blastp_pdb 1z6t_A 311 565 + 255 Gaps:57 40.95 591 27.27 2e-07 mol:protein length:591 Apoptotic protease activating factor 1
blastp_pdb 3iza_G 311 565 + 255 Gaps:57 19.16 1263 27.69 6e-07 mol:protein length:1263 Apoptotic protease-activating factor 1
blastp_pdb 3iza_F 311 565 + 255 Gaps:57 19.16 1263 27.69 6e-07 mol:protein length:1263 Apoptotic protease-activating factor 1
blastp_pdb 3iza_E 311 565 + 255 Gaps:57 19.16 1263 27.69 6e-07 mol:protein length:1263 Apoptotic protease-activating factor 1
blastp_pdb 3iza_D 311 565 + 255 Gaps:57 19.16 1263 27.69 6e-07 mol:protein length:1263 Apoptotic protease-activating factor 1
blastp_pdb 3iza_C 311 565 + 255 Gaps:57 19.16 1263 27.69 6e-07 mol:protein length:1263 Apoptotic protease-activating factor 1
blastp_pdb 3iza_B 311 565 + 255 Gaps:57 19.16 1263 27.69 6e-07 mol:protein length:1263 Apoptotic protease-activating factor 1
blastp_uniprot_sprot sp|Q9M667|RPP13_ARATH 1 808 + 808 Gaps:103 88.98 835 36.20 1e-97 Disease resistance protein RPP13 OS Arabidopsis thaliana GN RPP13 PE 2 SV 2
blastp_uniprot_sprot sp|P0C8S1|RP8L2_ARATH 1 868 + 868 Gaps:138 94.04 906 30.99 3e-89 Probable disease resistance RPP8-like protein 2 OS Arabidopsis thaliana GN RPP8L2 PE 3 SV 1
blastp_uniprot_sprot sp|Q9STE7|R13L3_ARATH 1 809 + 809 Gaps:118 88.67 847 34.89 2e-87 Putative disease resistance RPP13-like protein 3 OS Arabidopsis thaliana GN RPP13L3 PE 3 SV 1
blastp_uniprot_sprot sp|Q9STE5|R13L2_ARATH 1 862 + 862 Gaps:134 91.15 847 33.03 9e-86 Putative disease resistance RPP13-like protein 2 OS Arabidopsis thaliana GN RPP13L2 PE 3 SV 1
blastp_uniprot_sprot sp|Q9C646|RX24L_ARATH 5 803 + 799 Gaps:114 83.98 899 32.72 2e-85 Probable disease resistance protein RXW24L OS Arabidopsis thaliana GN RXW24L PE 2 SV 1
blastp_uniprot_sprot sp|Q6L438|R1A6_SOLDE 6 868 + 863 Gaps:151 61.26 1306 33.25 1e-83 Putative late blight resistance protein homolog R1A-6 OS Solanum demissum GN R1A-6 PE 3 SV 2
blastp_uniprot_sprot sp|Q60CZ8|R1A10_SOLDE 6 868 + 863 Gaps:151 61.26 1306 33.25 1e-83 Putative late blight resistance protein homolog R1A-10 OS Solanum demissum GN R1A-10 PE 3 SV 1
blastp_uniprot_sprot sp|Q8W1E0|R1A_SOLDE 6 865 + 860 Gaps:153 59.94 1293 33.94 1e-81 Late blight resistance protein R1-A OS Solanum demissum GN R1A PE 3 SV 1
blastp_uniprot_sprot sp|Q9FJB5|RP8L3_ARATH 1 867 + 867 Gaps:161 93.67 901 30.57 7e-80 Disease resistance RPP8-like protein 3 OS Arabidopsis thaliana GN RPP8L3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SX38|DRL4_ARATH 1 557 + 557 Gaps:85 60.91 857 36.21 1e-79 Putative disease resistance protein At1g50180 OS Arabidopsis thaliana GN At1g50180 PE 3 SV 2

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 787 807 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PRINTS 181 196 16 PR00364 none Disease resistance protein signature none
PRINTS 768 784 17 PR00364 none Disease resistance protein signature none
PRINTS 408 422 15 PR00364 none Disease resistance protein signature none
PANTHER 298 509 212 PTHR23155:SF445 none none none
PANTHER 298 509 212 PTHR23155 none none none
PANTHER 616 868 253 PTHR23155 none none none
PANTHER 5 241 237 PTHR23155:SF445 none none none
Phobius 808 924 117 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 616 868 253 PTHR23155:SF445 none none none
PANTHER 886 906 21 PTHR23155:SF445 none none none
SUPERFAMILY 294 472 179 SSF52540 none none IPR027417
SUPERFAMILY 145 244 100 SSF52540 none none IPR027417
PANTHER 886 906 21 PTHR23155 none none none
PANTHER 5 241 237 PTHR23155 none none none
Gene3D 297 356 60 G3DSA:3.40.50.300 none none IPR027417
Gene3D 174 242 69 G3DSA:3.40.50.300 none none IPR027417
Pfam 164 498 335 PF00931 none NB-ARC domain IPR002182
Gene3D 619 884 266 G3DSA:3.80.10.10 none none none
Phobius 1 786 786 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Coils 104 125 22 Coil none none none
SUPERFAMILY 536 884 349 SSF52058 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting