Protein : Qrob_P0011020.2 Q. robur
Protein Identifier  ? Qrob_P0011020.2 Organism . Name  Quercus robur
Score  96.0 Score Type  egn
Protein Description  (M=1) PTHR11685:SF119 - E3 UBIQUITIN-PROTEIN LIGASE ARI2-RELATED (PTHR11685:SF119) Code Enzyme  EC:6.3.2.19
Gene Prediction Quality  validated Protein length 

Sequence

Length: 511  
Kegg Orthology  K11968
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0004842 ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
GO:0016567 protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101205066 1 500 + 500 Gaps:45 92.19 589 73.30 0.0 probable E3 ubiquitin-protein ligase ARI1-like
blastp_kegg lcl|csv:101210618 1 500 + 500 Gaps:45 92.19 589 73.30 0.0 probable E3 ubiquitin-protein ligase ARI1-like
blastp_kegg lcl|cmo:103498436 1 500 + 500 Gaps:45 92.19 589 73.30 0.0 probable E3 ubiquitin-protein ligase ARI2
blastp_kegg lcl|pmum:103335511 1 502 + 502 Gaps:44 92.07 593 71.06 0.0 probable E3 ubiquitin-protein ligase ARI2
blastp_kegg lcl|pper:PRUPE_ppa003200mg 1 502 + 502 Gaps:44 92.07 593 70.88 0.0 hypothetical protein
blastp_kegg lcl|mdm:103418928 1 502 + 502 Gaps:47 92.42 594 70.13 0.0 probable E3 ubiquitin-protein ligase ARI1
blastp_kegg lcl|vvi:100257215 1 501 + 501 Gaps:44 92.53 589 69.72 0.0 probable E3 ubiquitin-protein ligase ARI1-like
blastp_kegg lcl|rcu:RCOM_0938350 1 502 + 502 Gaps:47 92.74 592 71.40 0.0 Protein ariadne-1 putative
blastp_kegg lcl|cic:CICLE_v10028072mg 1 503 + 503 Gaps:43 92.54 590 69.05 0.0 hypothetical protein
blastp_kegg lcl|cit:102617091 1 503 + 503 Gaps:43 92.54 590 69.05 0.0 probable E3 ubiquitin-protein ligase ARI1-like
blastp_uniprot_sprot sp|Q949V6|ARI1_ARATH 1 500 + 500 Gaps:45 91.29 597 62.20 0.0 Probable E3 ubiquitin-protein ligase ARI1 OS Arabidopsis thaliana GN ARI1 PE 2 SV 1
blastp_uniprot_sprot sp|Q84RR2|ARI2_ARATH 1 497 + 497 Gaps:51 91.40 593 62.36 0.0 Probable E3 ubiquitin-protein ligase ARI2 OS Arabidopsis thaliana GN ARI2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVX0|ARI3_ARATH 37 481 + 445 Gaps:39 88.27 537 55.70 1e-178 Probable E3 ubiquitin-protein ligase ARI3 OS Arabidopsis thaliana GN ARI3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVW9|ARI4_ARATH 37 481 + 445 Gaps:43 88.85 529 55.32 4e-171 Putative E3 ubiquitin-protein ligase ARI4 OS Arabidopsis thaliana GN ARI4 PE 5 SV 2
blastp_uniprot_sprot sp|Q9SKC2|ARI11_ARATH 39 480 + 442 Gaps:74 84.50 542 30.35 5e-51 Probable E3 ubiquitin-protein ligase ARI11 OS Arabidopsis thaliana GN ARI11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SKC4|ARI10_ARATH 39 454 + 416 Gaps:64 83.66 514 30.93 8e-51 Probable E3 ubiquitin-protein ligase ARI10 OS Arabidopsis thaliana GN ARI10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SKC3|ARI9_ARATH 39 455 + 417 Gaps:86 81.22 543 29.02 2e-48 Probable E3 ubiquitin-protein ligase ARI9 OS Arabidopsis thaliana GN ARI9 PE 2 SV 1
blastp_uniprot_sprot sp|Q6T486|RBRA_DICDI 43 457 + 415 Gaps:61 85.38 520 28.83 5e-48 Probable E3 ubiquitin-protein ligase rbrA OS Dictyostelium discoideum GN rbrA PE 3 SV 1
blastp_uniprot_sprot sp|Q6NW85|ARI1L_DANRE 43 454 + 412 Gaps:61 81.61 533 28.97 8e-48 E3 ubiquitin-protein ligase arih1l OS Danio rerio GN arih1l PE 2 SV 1
blastp_uniprot_sprot sp|Q9Z1K5|ARI1_MOUSE 41 454 + 414 Gaps:61 78.74 555 29.29 1e-47 E3 ubiquitin-protein ligase ARIH1 OS Mus musculus GN Arih1 PE 2 SV 3
rpsblast_cdd gnl|CDD|128895 178 240 + 63 Gaps:3 100.00 64 53.12 2e-12 smart00647 IBR In Between Ring fingers. the domains occurs between pairs og RING fingers.
rpsblast_cdd gnl|CDD|201821 178 240 + 63 Gaps:2 100.00 63 46.03 7e-11 pfam01485 IBR IBR domain. The IBR (In Between Ring fingers) domain is often found to occur between pairs of ring fingers (pfam00097). This domain has also been called the C6HC domain and DRIL (for double RING finger linked) domain. Proteins that contain two Ring fingers and an IBR domain (these proteins are also termed RBR family proteins) are thought to exist in all eukaryotic organisms. RBR family members play roles in protein quality control and can indirectly regulate transcription. Evidence suggests that RBR proteins are often parts of cullin-containing ubiquitin ligase complexes. The ubiquitin ligase Parkin is an RBR family protein whose mutations are involved in forms of familial Parkinson's disease.
rpsblast_kog gnl|CDD|37026 39 454 + 416 Gaps:56 95.50 444 34.20 1e-76 KOG1815 KOG1815 KOG1815 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|37023 51 285 + 235 Gaps:22 62.24 384 25.52 5e-24 KOG1812 KOG1812 KOG1812 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|37025 93 286 + 194 Gaps:32 48.99 445 22.48 1e-16 KOG1814 KOG1814 KOG1814 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|35230 105 285 + 181 Gaps:20 44.17 446 26.90 5e-12 KOG0006 KOG0006 KOG0006 E3 ubiquitin-protein ligase (Parkin protein) [Posttranslational modification protein turnover chaperones].

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 103 190 88 SSF57850 none none none
SUPERFAMILY 248 285 38 SSF57850 none none none
PANTHER 40 483 444 PTHR11685:SF119 none none none
SMART 178 240 63 SM00647 none In Between Ring fingers IPR002867
SUPERFAMILY 178 246 69 SSF57850 none none none
Gene3D 102 163 62 G3DSA:3.30.40.10 none none IPR013083
ProSiteProfiles 107 155 49 PS50089 none Zinc finger RING-type profile. IPR001841
Pfam 178 240 63 PF01485 none IBR domain IPR002867
PANTHER 40 483 444 PTHR11685 "UniPathway:UPA00143";signature_desc=RBR FAMILY (RING FINGER AND IBR DOMAIN-CONTAINING) none IPR031127

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting