Protein : Qrob_P0010830.2 Q. robur
Protein Identifier  ? Qrob_P0010830.2 Organism . Name  Quercus robur
Score  36.5 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 55  
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0 Synonyms

0 GO Terms

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0004s15630g 1 54 + 54 none 100.00 54 87.04 1e-26 POPTRDRAFT_556420 Mitochondrial import receptor subunit TOM6 family protein
blastp_kegg lcl|gmx:100805586 1 54 + 54 none 100.00 54 85.19 3e-26 mitochondrial import receptor subunit TOM6 homolog
blastp_kegg lcl|cmo:103498428 1 54 + 54 none 100.00 54 83.33 6e-26 mitochondrial import receptor subunit TOM6 homolog
blastp_kegg lcl|csv:101226265 1 54 + 54 none 100.00 54 83.33 6e-26 mitochondrial import receptor subunit TOM6 homolog
blastp_kegg lcl|csv:101210736 1 54 + 54 none 100.00 54 83.33 6e-26 mitochondrial import receptor subunit TOM6 homolog
blastp_kegg lcl|csv:101212000 1 54 + 54 none 100.00 54 83.33 6e-26 mitochondrial import receptor subunit TOM6 homolog
blastp_kegg lcl|pvu:PHAVU_011G049200g 1 54 + 54 none 100.00 54 81.48 8e-26 hypothetical protein
blastp_kegg lcl|cam:101499548 1 54 + 54 none 100.00 54 83.33 2e-25 mitochondrial import receptor subunit TOM6 homolog
blastp_kegg lcl|tcc:TCM_035188 1 54 + 54 none 100.00 54 83.33 2e-25 Translocase of the outer mitochondrial membrane 6
blastp_kegg lcl|gmx:100305785 1 54 + 54 none 100.00 54 81.48 3e-25 uncharacterized LOC100305785
blastp_uniprot_sprot sp|Q9XIA7|TOM6_ARATH 1 54 + 54 none 100.00 54 70.37 1e-23 Mitochondrial import receptor subunit TOM6 homolog OS Arabidopsis thaliana GN TOM6 PE 1 SV 1

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 21 40 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 41 54 14 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 20 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

1 Localization

Analysis Start End Length
TMHMM 21 43 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting