Protein : Qrob_P0010160.2 Q. robur
Protein Identifier  ? Qrob_P0010160.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=6) PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 553  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005089 Rho guanyl-nucleotide exchange factor activity Stimulates the exchange of guanyl nucleotides associated with a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0018s08900g 1 552 + 552 Gaps:37 99.64 555 71.07 0.0 POPTRDRAFT_809226 hypothetical protein
blastp_kegg lcl|cit:102610988 1 552 + 552 Gaps:44 100.00 562 69.40 0.0 rho guanine nucleotide exchange factor 8-like
blastp_kegg lcl|cic:CICLE_v10007894mg 1 552 + 552 Gaps:48 100.00 558 69.35 0.0 hypothetical protein
blastp_kegg lcl|gmx:100787455 1 552 + 552 Gaps:28 100.00 562 66.19 0.0 rho guanine nucleotide exchange factor 8-like
blastp_kegg lcl|pper:PRUPE_ppa020675mg 1 552 + 552 Gaps:23 100.00 553 68.90 0.0 hypothetical protein
blastp_kegg lcl|pmum:103340975 1 552 + 552 Gaps:23 100.00 553 68.90 0.0 rop guanine nucleotide exchange factor 9
blastp_kegg lcl|atr:s00109p00064220 15 552 + 538 Gaps:33 99.64 549 68.56 0.0 AMTR_s00109p00064220 hypothetical protein
blastp_kegg lcl|pda:103714718 1 552 + 552 Gaps:33 100.00 537 70.39 0.0 rho guanine nucleotide exchange factor 8-like
blastp_kegg lcl|rcu:RCOM_1493800 1 552 + 552 Gaps:12 100.00 554 67.33 0.0 hypothetical protein
blastp_kegg lcl|cam:101493602 1 552 + 552 Gaps:19 100.00 557 65.35 0.0 rho guanine nucleotide exchange factor 8-like
blastp_pdb 2wbl_B 90 453 + 364 Gaps:1 100.00 365 77.26 0.0 mol:protein length:365 RHO OF PLANTS GUANINE NUCLEOTIDE EXCHANGE FAC
blastp_pdb 2wbl_A 90 453 + 364 Gaps:1 100.00 365 77.26 0.0 mol:protein length:365 RHO OF PLANTS GUANINE NUCLEOTIDE EXCHANGE FAC
blastp_pdb 2nty_B 90 453 + 364 Gaps:1 100.00 365 77.26 0.0 mol:protein length:365 Emb|CAB41934.1
blastp_pdb 2nty_A 90 453 + 364 Gaps:1 100.00 365 77.26 0.0 mol:protein length:365 Emb|CAB41934.1
blastp_pdb 2ntx_B 90 453 + 364 Gaps:1 100.00 365 77.26 0.0 mol:protein length:365 Emb|CAB41934.1
blastp_pdb 2ntx_A 90 453 + 364 Gaps:1 100.00 365 77.26 0.0 mol:protein length:365 Emb|CAB41934.1
blastp_uniprot_sprot sp|Q9LV40|ROGF8_ARATH 1 552 + 552 Gaps:55 100.00 523 66.73 0.0 Rho guanine nucleotide exchange factor 8 OS Arabidopsis thaliana GN ROPGEF8 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SVQ3|ROGF9_ARATH 84 552 + 469 Gaps:39 90.52 517 67.52 0.0 Rop guanine nucleotide exchange factor 9 OS Arabidopsis thaliana GN ROPGEF9 PE 1 SV 1
blastp_uniprot_sprot sp|Q9CA89|ROGFC_ARATH 1 552 + 552 Gaps:63 100.00 515 63.50 0.0 Rop guanine nucleotide exchange factor 12 OS Arabidopsis thaliana GN ROPGEF12 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M811|ROGFB_ARATH 100 552 + 453 Gaps:23 81.26 539 68.72 0.0 Rop guanine nucleotide exchange factor 11 OS Arabidopsis thaliana GN ROPGEF11 PE 1 SV 1
blastp_uniprot_sprot sp|Q1KS66|ROGFA_ARATH 98 552 + 455 Gaps:10 91.48 493 62.97 0.0 Rop guanine nucleotide exchange factor 10 OS Arabidopsis thaliana GN ROPGEF10 PE 2 SV 1
blastp_uniprot_sprot sp|F4J1G1|ROGFD_ARATH 98 550 + 453 Gaps:27 77.43 576 59.87 2e-172 Rop guanine nucleotide exchange factor 13 OS Arabidopsis thaliana GN ROPGEF13 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LZN0|ROGF7_ARATH 98 449 + 352 Gaps:17 67.22 546 54.22 3e-135 Rop guanine nucleotide exchange factor 7 OS Arabidopsis thaliana GN ROPGEF7 PE 1 SV 1
blastp_uniprot_sprot sp|Q93ZY2|ROGF1_ARATH 98 444 + 347 Gaps:19 66.42 548 55.49 1e-134 Rop guanine nucleotide exchange factor 1 OS Arabidopsis thaliana GN ROPGEF1 PE 1 SV 2
blastp_uniprot_sprot sp|F4K295|ROGF5_ARATH 97 448 + 352 Gaps:22 60.88 611 52.96 1e-129 Rop guanine nucleotide exchange factor 5 OS Arabidopsis thaliana GN ROPGEF5 PE 2 SV 1
blastp_uniprot_sprot sp|A4IJ27|ROGF3_ARATH 99 444 + 346 Gaps:19 76.74 473 50.69 4e-122 Rop guanine nucleotide exchange factor 3 OS Arabidopsis thaliana GN ROPGEF3 PE 2 SV 1
rpsblast_cdd gnl|CDD|190740 96 450 + 355 Gaps:6 99.72 360 67.97 0.0 pfam03759 PRONE PRONE (Plant-specific Rop nucleotide exchanger). This is a functional guanine exchange factor (GEF) of plant Rho GTPase.

2 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 97 449 353 PF03759 none PRONE (Plant-specific Rop nucleotide exchanger) IPR005512
ProSiteProfiles 90 454 365 PS51334 none PRONE domain profile. IPR005512

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 12   Mitochondrion 3 0.025 0.819 NON-PLANT 12