Protein : Qrob_P0009970.2 Q. robur
Protein Identifier  ? Qrob_P0009970.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR31413:SF2 - AFP HOMOLOG 2 (PTHR31413:SF2) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 494  
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Sequence Feature Displayer

Protein Sequence Displayer

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0 Synonyms

0 GO Terms

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103340872 1 493 + 493 Gaps:13 100.00 500 74.00 0.0 ninja-family protein mc410
blastp_kegg lcl|pper:PRUPE_ppa004604mg 1 493 + 493 Gaps:13 100.00 500 73.60 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1050740 1 493 + 493 Gaps:18 100.00 509 69.16 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10008049mg 1 493 + 493 Gaps:25 100.00 510 68.04 0.0 hypothetical protein
blastp_kegg lcl|cit:102618220 1 493 + 493 Gaps:25 100.00 510 68.04 0.0 ninja-family protein mc410-like
blastp_kegg lcl|pop:POPTR_0018s09210g 1 493 + 493 Gaps:25 100.00 512 69.92 0.0 POPTRDRAFT_779350 hypothetical protein
blastp_kegg lcl|vvi:100257586 1 493 + 493 Gaps:25 100.00 510 68.43 0.0 ninja-family protein mc410-like
blastp_kegg lcl|pxb:103943882 1 493 + 493 Gaps:11 100.00 502 68.73 0.0 ninja-family protein mc410
blastp_kegg lcl|mdm:103438111 1 493 + 493 Gaps:12 100.00 501 69.06 0.0 ninja-family protein mc410-like
blastp_kegg lcl|tcc:TCM_037821 1 493 + 493 Gaps:42 100.00 485 70.52 0.0 Interactor of JAZ putative isoform 1
blastp_uniprot_sprot sp|Q53HY2|NINJA_TOBAC 3 493 + 491 Gaps:28 99.80 510 55.99 3e-177 Ninja-family protein mc410 OS Nicotiana tabacum GN MC410 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SV55|NINJA_ARATH 1 479 + 479 Gaps:91 98.35 425 55.50 1e-120 AFP homolog 2 OS Arabidopsis thaliana GN AFPH2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6AT41|NNJA4_ORYSJ 47 492 + 446 Gaps:62 88.25 451 41.21 4e-62 Ninja-family protein Os05g0558800 OS Oryza sativa subsp. japonica GN Os05g0558800 PE 2 SV 1
blastp_uniprot_sprot sp|B6TCE8|NNJA8_MAIZE 111 492 + 382 Gaps:66 74.06 478 42.66 2e-58 Ninja-family protein 8 OS Zea mays PE 2 SV 1
blastp_uniprot_sprot sp|B4FXN6|NNJA7_MAIZE 111 492 + 382 Gaps:66 74.06 478 42.37 8e-58 Ninja-family protein 7 OS Zea mays PE 2 SV 1
blastp_uniprot_sprot sp|Q94F39|AFP3_ARATH 418 466 + 49 Gaps:1 21.65 231 56.00 2e-12 Ninja-family protein AFP3 OS Arabidopsis thaliana GN AFP3 PE 1 SV 1
blastp_uniprot_sprot sp|Q6YVY6|NNJA2_ORYSJ 418 466 + 49 Gaps:1 15.67 319 52.00 1e-10 Ninja-family protein Os07g0602900 OS Oryza sativa subsp. japonica GN Os07g0602900 PE 2 SV 1
blastp_uniprot_sprot sp|B1B5D4|NNJA2_WHEAT 418 466 + 49 Gaps:1 15.82 316 50.00 2e-10 Ninja-family protein 2 OS Triticum aestivum GN AFP-B1 PE 3 SV 1
blastp_uniprot_sprot sp|B1B5D3|NNJA1_WHEAT 418 466 + 49 Gaps:1 15.87 315 50.00 2e-10 Ninja-family protein 1 OS Triticum aestivum GN AFP-A1 PE 3 SV 1
blastp_uniprot_sprot sp|B6TNQ7|NNJA6_MAIZE 418 466 + 49 Gaps:1 17.36 288 50.00 5e-10 Ninja-family protein 6 OS Zea mays PE 2 SV 1
rpsblast_cdd gnl|CDD|149137 419 471 + 53 Gaps:1 19.08 283 51.85 5e-11 pfam07897 DUF1675 Protein of unknown function (DUF1675). The members of this family are sequences derived from hypothetical plant proteins of unknown function. One member of this family is annotated as a putative RNA-binding protein but no evidence was found to support this.

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 393 489 97 PTHR31413:SF2 none none none
PANTHER 393 489 97 PTHR31413 none none none
Pfam 418 472 55 PF07897 none Protein of unknown function (DUF1675) IPR012463

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03

0 Targeting