Protein : Qrob_P0009550.2 Q. robur
Protein Identifier  ? Qrob_P0009550.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=4) 5.3.1.6 - Ribose-5-phosphate isomerase. Code Enzyme  EC:5.3.1.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 450  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0004751 ribose-5-phosphate isomerase activity Catalysis of the reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate.
GO:0009052 pentose-phosphate shunt, non-oxidative branch The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0006s03820g 4 446 + 443 Gaps:19 89.38 499 53.14 8e-143 POPTRDRAFT_560392 hypothetical protein
blastp_kegg lcl|smo:SELMODRAFT_448303 243 446 + 204 Gaps:1 74.55 275 65.37 8e-89 hypothetical protein
blastp_kegg lcl|smo:SELMODRAFT_441314 243 446 + 204 Gaps:1 74.55 275 65.37 1e-88 hypothetical protein
blastp_kegg lcl|ppp:PHYPADRAFT_145803 187 446 + 260 Gaps:6 83.54 316 56.44 4e-88 hypothetical protein
blastp_kegg lcl|ppp:PHYPADRAFT_224305 262 446 + 185 Gaps:2 81.86 226 65.95 7e-76 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s03810g 262 446 + 185 Gaps:25 79.41 204 80.25 4e-73 hypothetical protein
blastp_kegg lcl|atr:s00095p00013730 213 396 + 184 Gaps:15 76.40 250 64.92 1e-68 AMTR_s00095p00013730 hypothetical protein
blastp_kegg lcl|thn:NK55_03395 239 446 + 208 Gaps:2 88.51 235 52.40 8e-60 rpiA ribose-5-phosphate isomerase A RpiA (EC:5.3.1.6)
blastp_kegg lcl|tel:tll1273 246 446 + 201 Gaps:2 85.17 236 52.74 3e-59 rpiA ribose-5-phosphate isomerase A (EC:5.3.1.6)
blastp_kegg lcl|cyn:Cyan7425_4885 236 446 + 211 Gaps:2 89.03 237 48.82 1e-57 ribose-5-phosphate isomerase A
blastp_pdb 3ixq_D 242 446 + 205 Gaps:6 89.82 226 50.25 2e-44 mol:protein length:226 Ribose-5-phosphate isomerase A
blastp_pdb 3ixq_C 242 446 + 205 Gaps:6 89.82 226 50.25 2e-44 mol:protein length:226 Ribose-5-phosphate isomerase A
blastp_pdb 3ixq_B 242 446 + 205 Gaps:6 89.82 226 50.25 2e-44 mol:protein length:226 Ribose-5-phosphate isomerase A
blastp_pdb 3ixq_A 242 446 + 205 Gaps:6 89.82 226 50.25 2e-44 mol:protein length:226 Ribose-5-phosphate isomerase A
blastp_pdb 1lk7_D 240 446 + 207 Gaps:3 89.96 229 42.23 4e-42 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk7_C 240 446 + 207 Gaps:3 89.96 229 42.23 4e-42 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk7_B 240 446 + 207 Gaps:3 89.96 229 42.23 4e-42 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk7_A 240 446 + 207 Gaps:3 89.96 229 42.23 4e-42 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk5_D 240 446 + 207 Gaps:3 89.96 229 42.23 4e-42 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk5_C 240 446 + 207 Gaps:3 89.96 229 42.23 4e-42 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_uniprot_sprot sp|Q8DJF2|RPIA_THEEB 246 446 + 201 Gaps:2 85.17 236 52.74 1e-60 Ribose-5-phosphate isomerase A OS Thermosynechococcus elongatus (strain BP-1) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|B8HN58|RPIA_CYAP4 236 446 + 211 Gaps:2 89.03 237 48.82 4e-59 Ribose-5-phosphate isomerase A OS Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q111U2|RPIA_TRIEI 238 446 + 209 Gaps:2 88.19 237 46.89 4e-56 Ribose-5-phosphate isomerase A OS Trichodesmium erythraeum (strain IMS101) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|B7K6D3|RPIA_CYAP8 245 446 + 202 Gaps:2 85.23 237 49.01 2e-54 Ribose-5-phosphate isomerase A OS Cyanothece sp. (strain PCC 8801) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q3M4J7|RPIA_ANAVT 245 446 + 202 Gaps:2 85.59 236 49.01 6e-53 Ribose-5-phosphate isomerase A OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q8YYG2|RPIA_NOSS1 245 446 + 202 Gaps:2 85.59 236 49.01 8e-53 Ribose-5-phosphate isomerase A OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|B1XL11|RPIA_SYNP2 245 446 + 202 Gaps:2 86.70 233 47.52 1e-52 Ribose-5-phosphate isomerase A OS Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q55766|RPIA_SYNY3 241 446 + 206 Gaps:2 87.66 235 44.66 3e-52 Ribose-5-phosphate isomerase A OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q5N3J1|RPIA_SYNP6 246 446 + 201 Gaps:2 86.64 232 48.26 1e-49 Ribose-5-phosphate isomerase A OS Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN rpiA PE 3 SV 2
blastp_uniprot_sprot sp|A5GNH7|RPIA_SYNPW 243 446 + 204 Gaps:1 86.13 238 46.34 2e-49 Ribose-5-phosphate isomerase A OS Synechococcus sp. (strain WH7803) GN rpiA PE 3 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 238 446 209 PTHR11934 "KEGG:00030+5.3.1.6","KEGG:00051+5.3.1.6","KEGG:00710+5.3.1.6","MetaCyc:PWY-1861","MetaCyc:PWY-5723","UniPathway:UPA00115";signature_desc=RIBOSE-5-PHOSPHATE ISOMERASE none IPR004788
Pfam 60 146 87 PF03101 none FAR1 DNA-binding domain IPR004330
Gene3D 247 383 137 G3DSA:3.40.50.1360 none none none
TIGRFAM 247 446 200 TIGR00021 "KEGG:00030+5.3.1.6","KEGG:00051+5.3.1.6","KEGG:00710+5.3.1.6","MetaCyc:PWY-1861","MetaCyc:PWY-5723","UniPathway:UPA00115" rpiA: ribose 5-phosphate isomerase A IPR004788
Gene3D 384 446 63 G3DSA:3.30.70.260 none none none
SUPERFAMILY 410 420 11 SSF100950 none none none
SUPERFAMILY 246 382 137 SSF100950 none none none
SUPERFAMILY 372 445 74 SSF75445 none none none
Pfam 290 446 157 PF06026 "KEGG:00030+5.3.1.6","KEGG:00051+5.3.1.6","KEGG:00710+5.3.1.6","MetaCyc:PWY-1861","MetaCyc:PWY-5723","UniPathway:UPA00115" Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IPR004788

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting