Protein : Qrob_P0009290.2 Q. robur
Protein Identifier  ? Qrob_P0009290.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=7) PTHR11802//PTHR11802:SF22 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SUBFAMILY NOT NAMED (PTHR11802:SF22) Code Enzyme  EC:3.4.16.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 459  
Kegg Orthology  K16297
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0004185 serine-type carboxypeptidase activity Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10011695mg 1 450 + 450 Gaps:7 99.56 455 75.50 0.0 hypothetical protein
blastp_kegg lcl|cit:102609406 1 450 + 450 Gaps:7 99.56 455 75.50 0.0 serine carboxypeptidase-like 45-like
blastp_kegg lcl|rcu:RCOM_1633620 1 451 + 451 Gaps:8 98.06 464 74.95 0.0 serine carboxypeptidase putative (EC:3.4.16.6)
blastp_kegg lcl|vvi:100260104 16 452 + 437 Gaps:5 93.25 474 75.34 0.0 serine carboxypeptidase-like 45-like
blastp_kegg lcl|pop:POPTR_0006s03490g 2 450 + 449 Gaps:7 98.47 459 75.44 0.0 POPTRDRAFT_560367 hypothetical protein
blastp_kegg lcl|gmx:100805028 16 451 + 436 Gaps:8 95.69 464 74.10 0.0 serine carboxypeptidase-like 45-like
blastp_kegg lcl|pvu:PHAVU_007G242200g 1 451 + 451 Gaps:8 98.71 465 70.37 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa026347mg 1 452 + 452 Gaps:6 99.35 461 68.12 0.0 hypothetical protein
blastp_kegg lcl|cam:101493808 7 455 + 449 Gaps:6 98.05 462 69.76 0.0 serine carboxypeptidase-like 45-like
blastp_kegg lcl|pmum:103339174 8 452 + 445 Gaps:7 98.68 456 67.78 0.0 serine carboxypeptidase-like 45
blastp_pdb 3sc2_A 31 283 + 253 Gaps:10 96.14 259 47.79 6e-71 mol:protein length:259 SERINE CARBOXYPEPTIDASE II (CPDW-II)
blastp_pdb 1bcs_A 31 283 + 253 Gaps:10 94.68 263 47.79 1e-70 mol:protein length:263 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1bcr_A 31 283 + 253 Gaps:10 94.68 263 47.79 1e-70 mol:protein length:263 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1whs_A 31 283 + 253 Gaps:10 97.65 255 47.79 1e-70 mol:protein length:255 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1wht_A 31 283 + 253 Gaps:10 97.27 256 47.79 1e-70 mol:protein length:256 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1ivy_B 31 444 + 414 Gaps:52 97.79 452 35.29 2e-64 mol:protein length:452 HUMAN PROTECTIVE PROTEIN
blastp_pdb 1ivy_A 31 444 + 414 Gaps:52 97.79 452 35.29 2e-64 mol:protein length:452 HUMAN PROTECTIVE PROTEIN
blastp_pdb 1gxs_C 29 283 + 255 Gaps:17 93.33 270 45.24 3e-55 mol:protein length:270 P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN A
blastp_pdb 1gxs_A 29 283 + 255 Gaps:17 93.33 270 45.24 3e-55 mol:protein length:270 P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN A
blastp_pdb 1ysc_A 42 446 + 405 Gaps:62 96.20 421 30.12 4e-38 mol:protein length:421 SERINE CARBOXYPEPTIDASE
blastp_uniprot_sprot sp|Q8VY01|SCP46_ARATH 26 451 + 426 Gaps:10 93.76 465 66.51 0.0 Serine carboxypeptidase-like 46 OS Arabidopsis thaliana GN SCPL46 PE 2 SV 1
blastp_uniprot_sprot sp|Q93Y09|SCP45_ARATH 31 451 + 421 Gaps:8 93.06 461 66.20 0.0 Serine carboxypeptidase-like 45 OS Arabidopsis thaliana GN SCPL45 PE 2 SV 1
blastp_uniprot_sprot sp|Q9MAR8|SCP44_ARATH 32 458 + 427 Gaps:18 92.07 479 47.85 2e-143 Serine carboxypeptidase-like 44 OS Arabidopsis thaliana GN SCPL44 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH05|SCP42_ARATH 32 452 + 421 Gaps:17 91.75 473 47.70 8e-139 Serine carboxypeptidase-like 42 OS Arabidopsis thaliana GN SCPL42 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH06|SCP41_ARATH 32 458 + 427 Gaps:17 93.82 469 46.36 8e-136 Serine carboxypeptidase-like 41 OS Arabidopsis thaliana GN SCPL41 PE 2 SV 1
blastp_uniprot_sprot sp|Q84W27|SCP43_ARATH 7 455 + 449 Gaps:33 97.29 442 46.28 3e-129 Serine carboxypeptidase-like 43 OS Arabidopsis thaliana GN SCPL43 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M099|SCP24_ARATH 31 452 + 422 Gaps:41 93.12 465 43.65 1e-117 Serine carboxypeptidase 24 OS Arabidopsis thaliana GN SCPL24 PE 1 SV 1
blastp_uniprot_sprot sp|O82229|SCP23_ARATH 32 452 + 421 Gaps:36 93.17 454 44.44 9e-114 Putative serine carboxypeptidase-like 23 OS Arabidopsis thaliana GN SCPL23 PE 2 SV 2
blastp_uniprot_sprot sp|Q8S8K6|SCP28_ARATH 7 454 + 448 Gaps:35 99.78 462 41.21 1e-113 Serine carboxypeptidase-like 28 OS Arabidopsis thaliana GN SCPL28 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZUG3|SCP38_ARATH 32 453 + 422 Gaps:26 87.06 487 41.75 4e-111 Serine carboxypeptidase-like 38 OS Arabidopsis thaliana GN SCPL38 PE 2 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 27 458 432 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 30 447 418 G3DSA:3.40.50.1820 none none IPR029058
SUPERFAMILY 33 448 416 SSF53474 none none IPR029058
ProSitePatterns 173 180 8 PS00131 none Serine carboxypeptidases, serine active site. IPR018202
PANTHER 7 451 445 PTHR11802 none none IPR001563
PANTHER 7 451 445 PTHR11802:SF22 none none none
Phobius 1 5 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 6 26 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 36 446 411 PF00450 none Serine carboxypeptidase IPR001563
PRINTS 416 429 14 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
PRINTS 110 122 13 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
PRINTS 159 184 26 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
PRINTS 123 133 11 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563

1 Localization

Analysis Start End Length
TMHMM 5 27 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 22   Secretory pathway 1 0.950 0.010 NON-PLANT 22