Protein : Qrob_P0009260.2 Q. robur
Protein Identifier  ? Qrob_P0009260.2 Organism . Name  Quercus robur
Score  88.0 Score Type  egn
Protein Description  (M=7) PTHR11802//PTHR11802:SF22 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SUBFAMILY NOT NAMED (PTHR11802:SF22) Code Enzyme  EC:3.4.16.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 540  
Kegg Orthology  K16297
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0004185 serine-type carboxypeptidase activity Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_023810 60 539 + 480 Gaps:14 99.57 470 63.46 0.0 Serine carboxypeptidase 45
blastp_kegg lcl|pop:POPTR_0006s03440g 60 539 + 480 Gaps:5 98.96 482 61.64 0.0 POPTRDRAFT_560360 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s03480g 56 539 + 484 Gaps:19 100.00 467 62.53 0.0 hypothetical protein
blastp_kegg lcl|cit:102609406 61 539 + 479 Gaps:27 99.34 455 64.38 0.0 serine carboxypeptidase-like 45-like
blastp_kegg lcl|vvi:100260104 81 539 + 459 Gaps:24 91.77 474 65.75 0.0 serine carboxypeptidase-like 45-like
blastp_kegg lcl|cic:CICLE_v10011695mg 61 539 + 479 Gaps:27 99.34 455 64.16 0.0 hypothetical protein
blastp_kegg lcl|pmum:103319135 60 537 + 478 Gaps:7 98.96 480 60.00 0.0 serine carboxypeptidase-like 45
blastp_kegg lcl|pper:PRUPE_ppa026347mg 61 539 + 479 Gaps:26 98.70 461 60.66 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1633620 60 537 + 478 Gaps:28 97.41 464 61.28 0.0 serine carboxypeptidase putative (EC:3.4.16.6)
blastp_kegg lcl|pvu:PHAVU_007G242200g 68 537 + 470 Gaps:25 97.42 465 60.71 0.0 hypothetical protein
blastp_pdb 1bcs_A 87 343 + 257 Gaps:16 95.44 263 52.19 5e-73 mol:protein length:263 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1bcr_A 87 343 + 257 Gaps:16 95.44 263 52.19 5e-73 mol:protein length:263 SERINE CARBOXYPEPTIDASE II
blastp_pdb 3sc2_A 87 343 + 257 Gaps:12 96.91 259 51.00 5e-73 mol:protein length:259 SERINE CARBOXYPEPTIDASE II (CPDW-II)
blastp_pdb 1whs_A 87 343 + 257 Gaps:12 98.43 255 51.00 6e-73 mol:protein length:255 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1wht_A 87 343 + 257 Gaps:12 98.05 256 51.00 6e-73 mol:protein length:256 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1ivy_B 85 535 + 451 Gaps:47 99.56 452 34.89 1e-63 mol:protein length:452 HUMAN PROTECTIVE PROTEIN
blastp_pdb 1ivy_A 85 535 + 451 Gaps:47 99.56 452 34.89 1e-63 mol:protein length:452 HUMAN PROTECTIVE PROTEIN
blastp_pdb 1gxs_C 88 343 + 256 Gaps:19 92.96 270 44.22 6e-54 mol:protein length:270 P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN A
blastp_pdb 1gxs_A 88 343 + 256 Gaps:19 92.96 270 44.22 6e-54 mol:protein length:270 P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN A
blastp_pdb 1ysc_A 96 533 + 438 Gaps:85 96.67 421 31.20 7e-34 mol:protein length:421 SERINE CARBOXYPEPTIDASE
blastp_uniprot_sprot sp|Q8VY01|SCP46_ARATH 87 537 + 451 Gaps:29 92.90 465 60.19 0.0 Serine carboxypeptidase-like 46 OS Arabidopsis thaliana GN SCPL46 PE 2 SV 1
blastp_uniprot_sprot sp|Q93Y09|SCP45_ARATH 87 537 + 451 Gaps:27 93.28 461 59.07 0.0 Serine carboxypeptidase-like 45 OS Arabidopsis thaliana GN SCPL45 PE 2 SV 1
blastp_uniprot_sprot sp|Q9MAR8|SCP44_ARATH 82 538 + 457 Gaps:51 92.28 479 45.48 2e-123 Serine carboxypeptidase-like 44 OS Arabidopsis thaliana GN SCPL44 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH05|SCP42_ARATH 84 538 + 455 Gaps:50 92.81 473 45.33 3e-118 Serine carboxypeptidase-like 42 OS Arabidopsis thaliana GN SCPL42 PE 2 SV 1
blastp_uniprot_sprot sp|Q84W27|SCP43_ARATH 60 538 + 479 Gaps:65 97.29 442 45.58 4e-115 Serine carboxypeptidase-like 43 OS Arabidopsis thaliana GN SCPL43 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH06|SCP41_ARATH 84 538 + 455 Gaps:32 93.60 469 44.19 2e-113 Serine carboxypeptidase-like 41 OS Arabidopsis thaliana GN SCPL41 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M099|SCP24_ARATH 88 539 + 452 Gaps:36 93.33 465 43.78 7e-111 Serine carboxypeptidase 24 OS Arabidopsis thaliana GN SCPL24 PE 1 SV 1
blastp_uniprot_sprot sp|Q4PSY2|SCP32_ARATH 64 537 + 474 Gaps:56 98.06 463 42.95 2e-109 Serine carboxypeptidase-like 32 OS Arabidopsis thaliana GN SCPL32 PE 2 SV 1
blastp_uniprot_sprot sp|O82229|SCP23_ARATH 88 539 + 452 Gaps:45 93.61 454 44.00 4e-109 Putative serine carboxypeptidase-like 23 OS Arabidopsis thaliana GN SCPL23 PE 2 SV 2
blastp_uniprot_sprot sp|Q8L9Y0|SCP25_ARATH 87 539 + 453 Gaps:30 92.81 473 43.51 1e-108 Serine carboxypeptidase-like 25 OS Arabidopsis thaliana GN SCPL25 PE 2 SV 2

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 503 516 14 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
PRINTS 168 180 13 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
PRINTS 217 242 26 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
PRINTS 181 191 11 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
Phobius 82 539 458 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 87 535 449 G3DSA:3.40.50.1820 none none IPR029058
Phobius 63 81 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 503 520 18 PS00560 none Serine carboxypeptidases, histidine active site. IPR018202
Phobius 1 62 62 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 87 538 452 PTHR11802:SF22 none none none
PANTHER 87 538 452 PTHR11802 none none IPR001563
SUPERFAMILY 90 345 256 SSF53474 none none IPR029058
SUPERFAMILY 383 537 155 SSF53474 none none IPR029058
Pfam 94 533 440 PF00450 none Serine carboxypeptidase IPR001563
ProSitePatterns 231 238 8 PS00131 none Serine carboxypeptidases, serine active site. IPR018202

1 Localization

Analysis Start End Length
TMHMM 63 80 17

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting