Protein : Qrob_P0008670.2 Q. robur
Protein Identifier  ? Qrob_P0008670.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) KOG0041 - Predicted Ca2+-binding protein EF-Hand protein superfamily [General function prediction only]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 169  
Kegg Orthology  K13448
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1464230 5 162 + 158 none 100.00 158 84.81 2e-93 Calmodulin putative (EC:1.3.1.74)
blastp_kegg lcl|pop:POPTR_0010s14280g 5 165 + 161 none 100.00 161 80.75 6e-93 POPTRDRAFT_658975 hypothetical protein
blastp_kegg lcl|pmum:103341400 5 162 + 158 none 100.00 158 82.91 2e-92 probable calcium-binding protein CML16
blastp_kegg lcl|pxb:103947344 5 162 + 158 none 100.00 158 81.65 3e-92 probable calcium-binding protein CML16
blastp_kegg lcl|pxb:103947331 5 162 + 158 none 100.00 158 81.65 3e-92 probable calcium-binding protein CML16
blastp_kegg lcl|mdm:103402749 5 162 + 158 none 100.00 158 82.28 3e-92 probable calcium-binding protein CML16
blastp_kegg lcl|pper:PRUPE_ppa012698mg 5 162 + 158 none 100.00 158 82.28 2e-91 hypothetical protein
blastp_kegg lcl|pxb:103946844 5 162 + 158 none 100.00 158 81.65 1e-90 probable calcium-binding protein CML16
blastp_kegg lcl|vvi:100264548 9 164 + 156 none 96.30 162 82.69 4e-89 probable calcium-binding protein CML16-like
blastp_kegg lcl|cmo:103489229 6 165 + 160 Gaps:1 100.00 161 78.88 1e-88 probable calcium-binding protein CML16
blastp_pdb 2ygg_B 5 158 + 154 Gaps:2 100.00 150 48.67 1e-33 mol:protein length:150 CALMODULIN
blastp_pdb 1ahr_A 3 158 + 156 Gaps:4 96.58 146 53.90 2e-33 mol:protein length:146 CALMODULIN
blastp_pdb 1ooj_A 5 158 + 154 Gaps:2 98.66 149 48.98 3e-33 mol:protein length:149 Calmodulin CMD-1
blastp_pdb 3l9i_C 5 158 + 154 Gaps:2 98.66 149 48.98 3e-33 mol:protein length:149 Calmodulin
blastp_pdb 3gn4_H 5 158 + 154 Gaps:2 98.66 149 48.98 3e-33 mol:protein length:149 Calmodulin
blastp_pdb 3gn4_F 5 158 + 154 Gaps:2 98.66 149 48.98 3e-33 mol:protein length:149 Calmodulin
blastp_pdb 3gn4_D 5 158 + 154 Gaps:2 98.66 149 48.98 3e-33 mol:protein length:149 Calmodulin
blastp_pdb 3gn4_B 5 158 + 154 Gaps:2 98.66 149 48.98 3e-33 mol:protein length:149 Calmodulin
blastp_pdb 2x51_B 5 158 + 154 Gaps:2 98.66 149 48.98 3e-33 mol:protein length:149 CALMODULIN
blastp_pdb 2vas_B 5 158 + 154 Gaps:2 98.66 149 48.98 3e-33 mol:protein length:149 CALMODULIN
blastp_uniprot_sprot sp|Q9LI84|CML16_ARATH 11 165 + 155 none 96.27 161 80.65 4e-87 Probable calcium-binding protein CML16 OS Arabidopsis thaliana GN CML16 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FZ75|CML15_ARATH 12 164 + 153 none 97.45 157 73.20 3e-80 Probable calcium-binding protein CML15 OS Arabidopsis thaliana GN CML15 PE 2 SV 1
blastp_uniprot_sprot sp|Q6L5F4|CML14_ORYSJ 9 162 + 154 Gaps:1 89.60 173 67.10 7e-71 Probable calcium-binding protein CML14 OS Oryza sativa subsp. japonica GN CML14 PE 2 SV 1
blastp_uniprot_sprot sp|Q5ZD81|CML12_ORYSJ 7 162 + 156 Gaps:5 64.66 249 59.63 2e-62 Probable calcium-binding protein CML12 OS Oryza sativa subsp. japonica GN CML12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LQN4|CML17_ARATH 1 158 + 158 Gaps:4 97.59 166 49.38 7e-48 Probable calcium-binding protein CML17 OS Arabidopsis thaliana GN CML17 PE 2 SV 1
blastp_uniprot_sprot sp|Q9AWK2|CML11_ORYSJ 8 158 + 151 Gaps:1 72.04 211 53.29 1e-42 Probable calcium-binding protein CML11 OS Oryza sativa subsp. japonica GN CML11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M8U1|CML18_ARATH 7 158 + 152 Gaps:1 91.52 165 52.98 2e-40 Probable calcium-binding protein CML18 OS Arabidopsis thaliana GN CML18 PE 1 SV 1
blastp_uniprot_sprot sp|P05933|CALM_SCHPO 9 158 + 150 Gaps:2 95.33 150 50.35 5e-35 Calmodulin OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN cam1 PE 1 SV 1
blastp_uniprot_sprot sp|P21251|CALM_STIJA 5 158 + 154 Gaps:2 98.66 149 49.66 2e-33 Calmodulin OS Stichopus japonicus PE 1 SV 2
blastp_uniprot_sprot sp|O97341|CALM_SUBDO 5 155 + 151 Gaps:2 98.66 149 48.30 2e-33 Calmodulin OS Suberites domuncula PE 2 SV 3

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 8 149 142 PTHR10891:SF290 none none none
SMART 91 119 29 SM00054 none EF-hand, calcium binding motif IPR002048
SMART 16 44 29 SM00054 none EF-hand, calcium binding motif IPR002048
SMART 52 80 29 SM00054 none EF-hand, calcium binding motif IPR002048
SMART 127 155 29 SM00054 none EF-hand, calcium binding motif IPR002048
ProSiteProfiles 12 47 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Gene3D 8 154 147 G3DSA:1.10.238.10 none none IPR011992
ProSitePatterns 61 73 13 PS00018 none EF-hand calcium-binding domain. IPR018247
PANTHER 8 149 142 PTHR10891 none none none
ProSitePatterns 136 148 13 PS00018 none EF-hand calcium-binding domain. IPR018247
ProSiteProfiles 87 122 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
ProSiteProfiles 48 83 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Pfam 91 152 62 PF13499 none EF-hand domain pair IPR011992
Pfam 16 77 62 PF13499 none EF-hand domain pair IPR011992
ProSitePatterns 100 112 13 PS00018 none EF-hand calcium-binding domain. IPR018247
SUPERFAMILY 5 154 150 SSF47473 none none none
ProSitePatterns 25 37 13 PS00018 none EF-hand calcium-binding domain. IPR018247
ProSiteProfiles 123 158 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting