Protein : Qrob_P0008660.2 Q. robur
Protein Identifier  ? Qrob_P0008660.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 156  
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0 Synonyms

0 GO Terms

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100798756 1 153 + 153 Gaps:2 100.00 153 57.52 5e-51 uncharacterized LOC100798756
blastp_kegg lcl|pop:POPTR_0008s11070g 1 151 + 151 Gaps:4 79.68 187 61.07 2e-48 POPTRDRAFT_765976 hypothetical protein
blastp_kegg lcl|pmum:103341399 1 154 + 154 Gaps:12 100.00 154 55.19 5e-48 uncharacterized LOC103341399
blastp_kegg lcl|pper:PRUPE_ppa012803mg 1 154 + 154 Gaps:12 100.00 154 54.55 4e-47 hypothetical protein
blastp_kegg lcl|pxb:103947378 1 150 + 150 Gaps:7 94.23 156 57.14 3e-45 uncharacterized LOC103947378
blastp_kegg lcl|pxb:103947329 1 150 + 150 Gaps:7 94.23 156 57.14 3e-45 uncharacterized LOC103947329
blastp_kegg lcl|cit:102612688 1 139 + 139 Gaps:28 88.82 152 63.70 2e-42 uncharacterized LOC102612688
blastp_kegg lcl|pvu:PHAVU_003G281600g 1 153 + 153 Gaps:8 98.69 153 54.30 2e-39 hypothetical protein
blastp_kegg lcl|mdm:103402748 1 150 + 150 Gaps:9 94.16 154 55.86 4e-37 uncharacterized LOC103402748
blastp_kegg lcl|tcc:TCM_011903 1 121 + 121 Gaps:5 100.00 124 58.06 3e-35 hypothetical protein

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 32 155 124 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 12 31 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

1 Localization

Analysis Start End Length
TMHMM 12 31 19

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 35   Secretory pathway 2 0.944 0.005 NON-PLANT 35