Protein : Qrob_P0008530.2 Q. robur
Protein Identifier  ? Qrob_P0008530.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=1) KOG1991//KOG2274 - Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure Intracellular trafficking secretion and vesicular transport]. // Predicted importin 9 [Intracellular trafficking secretion and vesicular transport Nuclear structure]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 197  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101294462 6 193 + 188 Gaps:6 17.72 1027 69.78 1e-76 importin-9-like
blastp_kegg lcl|vvi:100268066 6 196 + 191 Gaps:3 17.96 1047 69.68 1e-76 importin-9-like
blastp_kegg lcl|mdm:103402753 6 196 + 191 Gaps:4 16.62 1125 67.38 4e-76 importin-9
blastp_kegg lcl|pxb:103946750 6 196 + 191 Gaps:5 18.22 1032 67.55 3e-75 importin-9
blastp_kegg lcl|pper:PRUPE_ppa000608mg 6 193 + 188 Gaps:2 17.32 1074 69.35 3e-75 hypothetical protein
blastp_kegg lcl|cit:102610802 6 195 + 190 Gaps:4 18.25 1030 70.21 7e-72 importin-9-like
blastp_kegg lcl|cic:CICLE_v10030592mg 6 195 + 190 Gaps:4 18.25 1030 69.68 1e-71 hypothetical protein
blastp_kegg lcl|tcc:TCM_011357 6 196 + 191 Gaps:3 18.43 1020 67.55 9e-71 ARM repeat superfamily protein isoform 1
blastp_kegg lcl|gmx:100790154 6 196 + 191 Gaps:4 18.23 1026 65.78 1e-69 importin-9-like
blastp_kegg lcl|pvu:PHAVU_003G034100g 6 196 + 191 Gaps:4 18.30 1022 64.17 2e-69 hypothetical protein
blastp_uniprot_sprot sp|Q96P70|IPO9_HUMAN 6 193 + 188 Gaps:14 18.06 1041 28.19 3e-07 Importin-9 OS Homo sapiens GN IPO9 PE 1 SV 3
blastp_uniprot_sprot sp|Q91YE6|IPO9_MOUSE 6 193 + 188 Gaps:14 18.06 1041 28.19 5e-07 Importin-9 OS Mus musculus GN Ipo9 PE 1 SV 3
rpsblast_kog gnl|CDD|37485 6 195 + 190 Gaps:8 18.31 1005 35.87 1e-39 KOG2274 KOG2274 KOG2274 Predicted importin 9 [Intracellular trafficking secretion and vesicular transport Nuclear structure].
rpsblast_kog gnl|CDD|37202 58 196 + 139 Gaps:8 12.97 1010 26.72 6e-07 KOG1991 KOG1991 KOG1991 Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure Intracellular trafficking secretion and vesicular transport].

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 6 196 191 PTHR10997:SF9 none none none
Phobius 12 21 10 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 6 196 191 PTHR10997 none none none
Phobius 1 11 11 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 27 196 170 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 22 26 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 138 195 58 SSF48371 none none IPR016024
SUPERFAMILY 7 28 22 SSF48371 none none IPR016024
SUPERFAMILY 59 107 49 SSF48371 none none IPR016024
Phobius 1 26 26 SIGNAL_PEPTIDE none Signal peptide region none

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 28   Secretory pathway 3 0.773 0.317 NON-PLANT 28