Protein : Qrob_P0008490.2 Q. robur
Protein Identifier  ? Qrob_P0008490.2 Organism . Name  Quercus robur
Score  24.2 Score Type  egn
Protein Description  (M=4) PTHR10997:SF9 - IMPORTIN 9 (IMP9) (RAN-BINDING PROTEIN 9) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 195  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101294462 16 172 + 157 Gaps:5 14.80 1027 75.00 7e-73 importin-9-like
blastp_kegg lcl|pxb:103946750 34 172 + 139 none 13.47 1032 79.86 1e-72 importin-9
blastp_kegg lcl|mdm:103402753 34 172 + 139 none 12.36 1125 79.14 4e-71 importin-9
blastp_kegg lcl|pper:PRUPE_ppa000608mg 16 191 + 176 Gaps:6 16.01 1074 68.02 4e-71 hypothetical protein
blastp_kegg lcl|pmum:103341627 34 191 + 158 Gaps:1 15.51 1025 69.81 4e-70 importin-9
blastp_kegg lcl|tcc:TCM_011357 25 172 + 148 none 14.51 1020 72.97 6e-69 ARM repeat superfamily protein isoform 1
blastp_kegg lcl|vvi:100268066 34 172 + 139 none 13.28 1047 75.54 8e-69 importin-9-like
blastp_kegg lcl|cic:CICLE_v10030592mg 30 172 + 143 none 13.88 1030 72.03 5e-68 hypothetical protein
blastp_kegg lcl|crb:CARUB_v10010981mg 34 172 + 139 none 13.91 999 75.54 6e-67 hypothetical protein
blastp_kegg lcl|cit:102610802 30 172 + 143 none 13.88 1030 71.33 9e-67 importin-9-like
blastp_uniprot_sprot sp|Q91YE6|IPO9_MOUSE 34 183 + 150 Gaps:7 14.31 1041 30.20 2e-10 Importin-9 OS Mus musculus GN Ipo9 PE 1 SV 3
blastp_uniprot_sprot sp|Q96P70|IPO9_HUMAN 34 183 + 150 Gaps:7 14.31 1041 30.20 3e-10 Importin-9 OS Homo sapiens GN IPO9 PE 1 SV 3
rpsblast_kog gnl|CDD|37485 35 172 + 138 Gaps:11 14.83 1005 40.94 7e-32 KOG2274 KOG2274 KOG2274 Predicted importin 9 [Intracellular trafficking secretion and vesicular transport Nuclear structure].

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 12 32 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 34 171 138 PTHR10997 none none none
SUPERFAMILY 73 137 65 SSF48371 none none IPR016024
SUPERFAMILY 19 38 20 SSF48371 none none IPR016024
Phobius 44 62 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 33 43 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 63 194 132 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 34 171 138 PTHR10997:SF9 none none none
Gene3D 40 133 94 G3DSA:1.25.10.10 none none IPR011989

2 Localization

Analysis Start End Length
TMHMM 15 33 18
TMHMM 45 62 17

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 23   Secretory pathway 2 0.931 0.013 NON-PLANT 23