Protein : Qrob_P0008480.2 Q. robur
Protein Identifier  ? Qrob_P0008480.2 Organism . Name  Quercus robur
Score  3.1 Score Type  egn
Protein Description  (M=1) KOG1991//KOG1992//KOG1993//KOG2171//KOG2274 - Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure Intracellular trafficking secretion and vesicular transport]. // Nuclear export receptor CSE1/CAS (importin beta superfamily) [Nuclear structure Intracellular trafficking secretion and vesicular transport]. // Nuclear transport receptor KAP120 (importin beta superfamily) [Nuclear structure Intracellular trafficking secretion and vesicular transport]. // Karyopherin (importin) beta 3 [Nuclear structure Intracellular trafficking secretion and vesicular transport]. // Predicted importin 9 [Intracellular trafficking secretion and vesicular transport Nuclear structure]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 139  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0008536 Ran GTPase binding Interacting selectively and non-covalently with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1464590 1 128 + 128 Gaps:2 13.32 961 82.81 6e-64 importin putative
blastp_kegg lcl|tcc:TCM_011357 1 128 + 128 Gaps:20 14.51 1020 72.30 3e-63 ARM repeat superfamily protein isoform 1
blastp_kegg lcl|cic:CICLE_v10030592mg 6 128 + 123 Gaps:22 14.08 1030 74.48 5e-63 hypothetical protein
blastp_kegg lcl|cmo:103489226 1 128 + 128 Gaps:22 14.66 1023 71.33 5e-63 importin-9
blastp_kegg lcl|cit:102610802 6 128 + 123 Gaps:22 14.08 1030 73.79 2e-62 importin-9-like
blastp_kegg lcl|csv:101229224 1 128 + 128 Gaps:22 14.66 1023 70.67 2e-62 importin-9-like
blastp_kegg lcl|csv:101216055 1 128 + 128 Gaps:22 14.66 1023 70.67 2e-62 importin-9-like
blastp_kegg lcl|fve:101294462 1 128 + 128 Gaps:25 14.90 1027 67.97 3e-61 importin-9-like
blastp_kegg lcl|cam:101497018 1 128 + 128 Gaps:22 14.62 1026 70.00 8e-61 importin-9-like
blastp_kegg lcl|gmx:100790154 1 128 + 128 Gaps:22 14.62 1026 68.67 2e-60 importin-9-like
blastp_uniprot_sprot sp|Q96P70|IPO9_HUMAN 9 134 + 126 Gaps:27 13.74 1041 30.77 3e-13 Importin-9 OS Homo sapiens GN IPO9 PE 1 SV 3
blastp_uniprot_sprot sp|Q91YE6|IPO9_MOUSE 9 134 + 126 Gaps:27 13.74 1041 30.77 3e-13 Importin-9 OS Mus musculus GN Ipo9 PE 1 SV 3
blastp_uniprot_sprot sp|Q8K2V6|IPO11_MOUSE 42 127 + 86 Gaps:4 8.41 975 29.27 7e-07 Importin-11 OS Mus musculus GN Ipo11 PE 1 SV 1
blastp_uniprot_sprot sp|Q9UI26|IPO11_HUMAN 42 127 + 86 Gaps:4 8.41 975 29.27 8e-07 Importin-11 OS Homo sapiens GN IPO11 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZPY7|XPO2_ARATH 26 128 + 103 Gaps:7 11.11 972 30.56 2e-06 Exportin-2 OS Arabidopsis thaliana GN CAS PE 2 SV 1
blastp_uniprot_sprot sp|P53067|IMB5_YEAST 31 128 + 98 Gaps:5 9.86 1004 33.33 4e-06 Importin subunit beta-5 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN KAP114 PE 1 SV 1
rpsblast_cdd gnl|CDD|35216 29 122 + 94 Gaps:4 9.50 947 30.00 2e-08 COG5657 CSE1 CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning].
rpsblast_kog gnl|CDD|37485 7 134 + 128 Gaps:28 14.53 1005 39.04 8e-32 KOG2274 KOG2274 KOG2274 Predicted importin 9 [Intracellular trafficking secretion and vesicular transport Nuclear structure].
rpsblast_kog gnl|CDD|37203 6 134 + 129 Gaps:26 15.73 960 28.48 4e-13 KOG1992 KOG1992 KOG1992 Nuclear export receptor CSE1/CAS (importin beta superfamily) [Nuclear structure Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|37204 12 123 + 112 Gaps:26 13.29 978 24.62 7e-13 KOG1993 KOG1993 KOG1993 Nuclear transport receptor KAP120 (importin beta superfamily) [Nuclear structure Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|37202 8 123 + 116 Gaps:22 13.66 1010 27.54 2e-11 KOG1991 KOG1991 KOG1991 Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|37382 7 135 + 129 Gaps:32 13.12 1075 26.95 1e-10 KOG2171 KOG2171 KOG2171 Karyopherin (importin) beta 3 [Nuclear structure Intracellular trafficking secretion and vesicular transport].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 2 127 126 PTHR10997:SF9 none none none
Gene3D 6 123 118 G3DSA:1.25.10.10 none none IPR011989
ProSiteProfiles 42 84 43 PS50166 none Importin-beta N-terminal domain profile. IPR001494
SUPERFAMILY 8 126 119 SSF48371 none none IPR016024
PANTHER 2 127 126 PTHR10997 none none none
Pfam 26 83 58 PF03810 none Importin-beta N-terminal domain IPR001494

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting