Protein : Qrob_P0008210.2 Q. robur

Protein Identifier  ? Qrob_P0008210.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=110) 1.11.1.7 - Peroxidase. Code Enzyme  EC:1.11.1.7
Gene Prediction Quality  validated Protein length 

Sequence

Length: 350  
Kegg Orthology  K00430

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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0020037 heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0004601 peroxidase activity Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
GO:0006979 response to oxidative stress Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0003s21640g 16 349 + 334 Gaps:3 95.20 354 73.59 4e-178 hypothetical protein
blastp_kegg lcl|pop:POPTR_0003s21620g 16 349 + 334 Gaps:6 97.42 349 72.65 3e-171 POPTRDRAFT_817692 peroxidase family protein
blastp_kegg lcl|pxb:103964015 7 345 + 339 Gaps:5 98.29 350 70.35 2e-167 peroxidase A2-like
blastp_kegg lcl|pmum:103327462 2 345 + 344 Gaps:8 96.44 365 67.90 9e-162 peroxidase A2-like
blastp_kegg lcl|pxb:103963973 17 336 + 320 Gaps:4 92.57 350 71.30 3e-161 peroxidase A2-like
blastp_kegg lcl|pop:POPTR_0001s05050g 16 349 + 334 Gaps:3 98.25 343 68.25 2e-160 POPTRDRAFT_547681 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa007826mg 15 339 + 325 none 91.81 354 69.23 4e-159 hypothetical protein
blastp_kegg lcl|vvi:100260291 14 349 + 336 Gaps:4 99.13 343 67.65 5e-159 peroxidase 15-like
blastp_kegg lcl|mdm:103452455 40 336 + 297 Gaps:4 95.56 315 75.08 1e-158 peroxidase A2-like
blastp_kegg lcl|pop:POPTR_0003s21610g 16 349 + 334 Gaps:3 98.25 343 67.06 3e-157 POPTRDRAFT_555257 hypothetical protein
blastp_pdb 1qo4_A 34 338 + 305 none 99.67 306 70.16 7e-155 mol:protein length:306 PEROXIDASE
blastp_pdb 1pa2_A 34 338 + 305 none 99.67 306 70.16 7e-155 mol:protein length:306 PEROXIDASE
blastp_pdb 1fhf_C 34 336 + 303 none 99.67 304 66.67 3e-132 mol:protein length:304 SEED COAT PEROXIDASE
blastp_pdb 1fhf_B 34 336 + 303 none 99.67 304 66.67 3e-132 mol:protein length:304 SEED COAT PEROXIDASE
blastp_pdb 1fhf_A 34 336 + 303 none 99.67 304 66.67 3e-132 mol:protein length:304 SEED COAT PEROXIDASE
blastp_pdb 1gwu_A 34 339 + 306 Gaps:2 99.68 309 58.77 2e-128 mol:protein length:309 PEROXIDASE C1A
blastp_pdb 1gx2_B 34 339 + 306 Gaps:2 99.68 309 58.44 3e-128 mol:protein length:309 PEROXIDASE C1A
blastp_pdb 1gx2_A 34 339 + 306 Gaps:2 99.68 309 58.44 3e-128 mol:protein length:309 PEROXIDASE C1A
blastp_pdb 3atj_B 34 339 + 306 Gaps:2 99.68 309 58.44 5e-128 mol:protein length:309 PROTEIN (HORSERADISH PEROXIDASE C1A)
blastp_pdb 3atj_A 34 339 + 306 Gaps:2 99.68 309 58.44 5e-128 mol:protein length:309 PROTEIN (HORSERADISH PEROXIDASE C1A)
blastp_uniprot_sprot sp|Q9LEH3|PER15_IPOBA 17 336 + 320 Gaps:1 98.17 327 69.78 2e-155 Peroxidase 15 OS Ipomoea batatas GN pod PE 1 SV 1
blastp_uniprot_sprot sp|Q9FG34|PER54_ARATH 8 336 + 329 Gaps:2 92.46 358 67.07 7e-155 Peroxidase 54 OS Arabidopsis thaliana GN PER54 PE 2 SV 1
blastp_uniprot_sprot sp|Q42578|PER53_ARATH 16 338 + 323 none 96.42 335 67.49 7e-155 Peroxidase 53 OS Arabidopsis thaliana GN PER53 PE 1 SV 1
blastp_uniprot_sprot sp|P80679|PERA2_ARMRU 34 338 + 305 none 100.00 305 67.54 1e-147 Peroxidase A2 OS Armoracia rusticana GN HRPA2 PE 1 SV 1
blastp_uniprot_sprot sp|P11965|PERX_TOBAC 20 336 + 317 Gaps:5 96.91 324 61.78 6e-135 Lignin-forming anionic peroxidase OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|P00433|PER1A_ARMRU 6 339 + 334 Gaps:3 94.90 353 57.61 2e-133 Peroxidase C1A OS Armoracia rusticana GN PRXC1A PE 1 SV 2
blastp_uniprot_sprot sp|Q9LHB9|PER32_ARATH 7 339 + 333 Gaps:3 94.89 352 57.49 1e-131 Peroxidase 32 OS Arabidopsis thaliana GN PER32 PE 1 SV 3
blastp_uniprot_sprot sp|P15233|PER1C_ARMRU 25 339 + 315 Gaps:2 95.48 332 58.68 6e-130 Peroxidase C1C (Fragment) OS Armoracia rusticana GN PRXC1C PE 3 SV 1
blastp_uniprot_sprot sp|P15232|PER1B_ARMRU 7 339 + 333 Gaps:3 95.16 351 57.78 2e-129 Peroxidase C1B OS Armoracia rusticana GN PRXC1B PE 3 SV 1
blastp_uniprot_sprot sp|P17180|PER3_ARMRU 12 336 + 325 Gaps:1 93.41 349 57.06 3e-129 Peroxidase C3 OS Armoracia rusticana GN PRXC3 PE 3 SV 1

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 16 339 324 PTHR31388 none none none
Phobius 1 12 12 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 40 186 147 G3DSA:1.10.520.10 none none none
PRINTS 254 269 16 PR00458 none Haem peroxidase superfamily signature IPR002016
PRINTS 128 145 18 PR00458 none Haem peroxidase superfamily signature IPR002016
PRINTS 194 209 16 PR00458 none Haem peroxidase superfamily signature IPR002016
PRINTS 146 158 13 PR00458 none Haem peroxidase superfamily signature IPR002016
PRINTS 66 80 15 PR00458 none Haem peroxidase superfamily signature IPR002016
ProSitePatterns 194 204 11 PS00435 none Peroxidases proximal heme-ligand signature. IPR019793
Gene3D 187 315 129 G3DSA:1.10.420.10 none none none
Phobius 27 33 7 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
ProSiteProfiles 34 336 303 PS50873 none Plant heme peroxidase family profile. IPR002016
PANTHER 16 339 324 PTHR31388:SF7 none none none
PRINTS 252 267 16 PR00461 "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" Plant peroxidase signature IPR000823
PRINTS 44 63 20 PR00461 "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" Plant peroxidase signature IPR000823
PRINTS 108 121 14 PR00461 "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" Plant peroxidase signature IPR000823
PRINTS 193 205 13 PR00461 "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" Plant peroxidase signature IPR000823
PRINTS 268 285 18 PR00461 "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" Plant peroxidase signature IPR000823
PRINTS 310 323 14 PR00461 "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" Plant peroxidase signature IPR000823
PRINTS 146 161 16 PR00461 "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" Plant peroxidase signature IPR000823
PRINTS 68 88 21 PR00461 "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" Plant peroxidase signature IPR000823
PRINTS 127 137 11 PR00461 "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" Plant peroxidase signature IPR000823
Phobius 1 33 33 SIGNAL_PEPTIDE none Signal peptide region none
ProSitePatterns 66 77 12 PS00436 none Peroxidases active site signature. IPR019794
SUPERFAMILY 34 336 303 SSF48113 none none IPR010255
Pfam 52 299 248 PF00141 none Peroxidase IPR002016
Phobius 13 26 14 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 34 349 316 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 40 39
TMHMM 7 29 22
SignalP_EUK 1 31 30

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 31   Secretory pathway 1 0.911 0.030 NON-PLANT 31