Protein : Qrob_P0008160.2 Q. robur
Protein Identifier  ? Qrob_P0008160.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) PTHR11089//PTHR11089:SF22 - GTP-BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Code Enzyme  EC:1.14.13.39
Gene Prediction Quality  validated Protein length 

Sequence

Length: 586  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103326371 31 569 + 539 Gaps:14 93.94 578 76.24 0.0 NO-associated protein 1 chloroplastic/mitochondrial
blastp_kegg lcl|pper:PRUPE_ppa003402mg 31 569 + 539 Gaps:14 94.11 577 76.24 0.0 hypothetical protein
blastp_kegg lcl|pxb:103954011 2 570 + 569 Gaps:18 99.48 580 73.31 0.0 NO-associated protein 1 chloroplastic/mitochondrial-like
blastp_kegg lcl|pxb:103964049 2 569 + 568 Gaps:34 99.65 578 73.09 0.0 NO-associated protein 1 chloroplastic/mitochondrial-like
blastp_kegg lcl|mdm:103452438 35 569 + 535 Gaps:11 92.39 578 76.97 0.0 NO-associated protein 1 chloroplastic/mitochondrial
blastp_kegg lcl|cam:101503230 52 577 + 526 Gaps:16 89.41 595 75.56 0.0 uncharacterized LOC101503230
blastp_kegg lcl|csv:101217981 3 573 + 571 Gaps:17 100.00 566 70.85 0.0 uncharacterized LOC101217981
blastp_kegg lcl|vvi:100244919 4 568 + 565 Gaps:20 97.77 584 71.10 0.0 uncharacterized LOC100244919
blastp_kegg lcl|cmo:103491566 3 573 + 571 Gaps:17 100.00 566 70.32 0.0 NO-associated protein 1 chloroplastic/mitochondrial
blastp_kegg lcl|gmx:100787200 3 581 + 579 Gaps:24 99.83 592 70.05 0.0 NO-associated protein 1 chloroplastic/mitochondrial-like
blastp_pdb 3h2y_A 128 525 + 398 Gaps:42 97.28 368 32.96 4e-42 mol:protein length:368 GTPase family protein
blastp_pdb 3ec1_B 128 525 + 398 Gaps:45 97.29 369 33.43 3e-40 mol:protein length:369 YqeH GTPase
blastp_pdb 3ec1_A 128 525 + 398 Gaps:45 97.29 369 33.43 3e-40 mol:protein length:369 YqeH GTPase
blastp_uniprot_sprot sp|P54453|YQEH_BACSU 128 525 + 398 Gaps:65 97.54 366 36.13 3e-42 Uncharacterized protein YqeH OS Bacillus subtilis (strain 168) GN yqeH PE 1 SV 1
blastp_uniprot_sprot sp|Q6YPG5|NOS_ORYSJ 72 500 + 429 Gaps:79 70.20 547 27.86 6e-25 Putative nitric oxide synthase OS Oryza sativa subsp. japonica GN Os02g0104700 PE 3 SV 1
blastp_uniprot_sprot sp|Q66GP9|NOA1_ARATH 149 500 + 352 Gaps:46 63.10 561 27.12 1e-24 NO-associated protein 1 chloroplastic/mitochondrial OS Arabidopsis thaliana GN NOA1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9JJG9|NOA1_MOUSE 363 527 + 165 Gaps:5 24.24 693 29.76 9e-12 Nitric oxide-associated protein 1 OS Mus musculus GN Noa1 PE 1 SV 1
blastp_uniprot_sprot sp|Q32LB9|NOA1_BOVIN 363 527 + 165 Gaps:6 24.35 694 30.18 2e-11 Nitric oxide-associated protein 1 OS Bos taurus GN NOA1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8NC60|NOA1_HUMAN 278 561 + 284 Gaps:22 54.73 698 27.49 6e-10 Nitric oxide-associated protein 1 OS Homo sapiens GN NOA1 PE 1 SV 2
blastp_uniprot_sprot sp|C4QZZ7|GEP3_PICPG 70 397 + 328 Gaps:62 51.74 576 27.85 2e-08 Genetic interactor of prohibitins 3 mitochondrial OS Komagataella pastoris (strain GS115 / ATCC 20864) GN GEP3 PE 3 SV 1
blastp_uniprot_sprot sp|Q09700|YA29_SCHPO 153 422 + 270 Gaps:66 51.32 491 28.57 3e-06 Uncharacterized protein C2F7.09c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC2F7.09c PE 4 SV 1
rpsblast_cdd gnl|CDD|184332 76 525 + 450 Gaps:85 100.00 365 38.90 9e-59 PRK13796 PRK13796 GTPase YqeH Provisional.
rpsblast_cdd gnl|CDD|132636 78 525 + 448 Gaps:88 100.00 360 36.39 4e-58 TIGR03597 GTPase_YqeH ribosome biogenesis GTPase YqeH. This family describes YqeH a member of a larger family of GTPases involved in ribosome biogenesis. Like YqlF it shows a cyclical permutation relative to GTPases EngA (in which the GTPase domain is duplicated) Era and others. Members of this protein family are found in a relatively small number of bacterial species including Bacillus subtilis but not Escherichia coli.
rpsblast_cdd gnl|CDD|206748 153 369 + 217 Gaps:32 100.00 191 42.41 4e-53 cd01855 YqeH Circularly permuted YqeH GTPase. YqeH is an essential GTP-binding protein. Depletion of YqeH induces an excess initiation of DNA replication suggesting that it negatively controls initiation of chromosome replication. The YqeH subfamily is common in eukaryotes and sporadically present in bacteria with probable acquisition by plants from chloroplasts. Proteins of the YqeH family contain all sequence motifs typical of the vast class of P-loop-containing GTPases but show a circular permutation with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases.
rpsblast_cdd gnl|CDD|31355 153 525 + 373 Gaps:80 99.69 322 26.48 8e-21 COG1161 COG1161 Predicted GTPases [General function prediction only].
rpsblast_cdd gnl|CDD|206746 196 369 + 174 Gaps:39 99.32 146 31.72 6e-08 cd01849 YlqF_related_GTPase Circularly permuted YlqF-related GTPases. These proteins are found in bacteria eukaryotes and archaea. They all exhibit a circular permutation of the GTPase signature motifs so that the order of the conserved G box motifs is G4-G5-G1-G2-G3 with G4 and G5 being permuted from the C-terminal region of proteins in the Ras superfamily to the N-terminus of YlqF-related GTPases.
rpsblast_cdd gnl|CDD|202050 310 389 + 80 Gaps:8 61.54 117 33.33 6e-08 pfam01926 MMR_HSR1 50S ribosome-binding GTPase. The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides with a preference for guanine nucleotide.
rpsblast_cdd gnl|CDD|206646 310 383 + 74 Gaps:15 44.10 161 38.03 7e-08 cd00880 Era_like E. coli Ras-like protein (Era)-like GTPase. The Era (E. coli Ras-like protein)-like family includes several distinct subfamilies (TrmE/ThdF FeoB YihA (EngB) Era and EngA/YfgK) that generally show sequence conservation in the region between the Walker A and B motifs (G1 and G3 box motifs) to the exclusion of other GTPases. TrmE is ubiquitous in bacteria and is a widespread mitochondrial protein in eukaryotes but is absent from archaea. The yeast member of TrmE family MSS1 is involved in mitochondrial translation bacterial members are often present in translation-related operons. FeoB represents an unusual adaptation of GTPases for high-affinity iron (II) transport. YihA (EngB) family of GTPases is typified by the E. coli YihA which is an essential protein involved in cell division control. Era is characterized by a distinct derivative of the KH domain (the pseudo-KH domain) which is located C-terminal to the GTPase domain. EngA and its orthologs are composed of two GTPase domains and since the sequences of the two domains are more similar to each other than to other GTPases it is likely that an ancient gene duplication rather than a fusion of evolutionarily distinct GTPases gave rise to this family.
rpsblast_cdd gnl|CDD|206749 235 370 + 136 Gaps:41 74.27 171 33.86 1e-07 cd01856 YlqF Circularly permuted YlqF GTPase. Proteins of the YlqF family contain all sequence motifs typical of the vast class of P-loop-containing GTPases but show a circular permutation with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases. The YlqF subfamily is represented in all eukaryotes as well as a phylogenetically diverse array of bacteria (including gram-positive bacteria proteobacteria Synechocystis Borrelia and Thermotoga).
rpsblast_cdd gnl|CDD|206752 196 368 + 173 Gaps:36 91.08 157 36.36 5e-07 cd01859 MJ1464 An uncharacterized circularly permuted subfamily of the Ras GTPases. This family represents archaeal GTPase typified by the protein MJ1464 from Methanococcus jannaschii. The members of this family show a circular permutation of the GTPase signature motifs so that C-terminal strands 5 6 and 7 (strands 6 contain the NKxD motif) are relocated to the N terminus.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 78 100 23 PTHR11089:SF22 none none none
PANTHER 141 426 286 PTHR11089:SF22 none none none
Pfam 308 377 70 PF01926 none 50S ribosome-binding GTPase IPR006073
Gene3D 195 371 177 G3DSA:3.40.50.300 none none IPR027417
PANTHER 78 100 23 PTHR11089 none none none
PANTHER 141 426 286 PTHR11089 none none none
SUPERFAMILY 195 412 218 SSF52540 none none IPR027417

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 16   Mitochondrion 5 0.086 0.484 NON-PLANT 16