Protein : Qrob_P0007970.2 Q. robur
Protein Identifier  ? Qrob_P0007970.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 116  
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0 Synonyms

0 GO Terms

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0003s21490g 1 115 + 115 none 100.00 115 78.26 1e-55 POPTRDRAFT_555244 hypothetical protein
blastp_kegg lcl|cam:101506213 2 114 + 113 none 97.41 116 76.99 9e-54 uncharacterized LOC101506213
blastp_kegg lcl|rcu:RCOM_0429320 9 115 + 107 none 89.17 120 78.50 2e-52 hypothetical protein
blastp_kegg lcl|tcc:TCM_040268 1 115 + 115 none 100.00 115 80.00 3e-50 Peripheral-type benzodiazepine receptor-associated protein 1
blastp_kegg lcl|pper:PRUPE_ppa013575mg 1 115 + 115 none 100.00 115 76.52 2e-49 hypothetical protein
blastp_kegg lcl|pxb:103964139 1 115 + 115 none 100.00 115 74.78 7e-49 uncharacterized LOC103964139
blastp_kegg lcl|gmx:100783517 1 114 + 114 none 99.13 115 74.56 2e-48 uncharacterized LOC100783517
blastp_kegg lcl|mdm:103452459 1 115 + 115 none 10.49 1096 76.52 5e-48 DNA (cytosine-5)-methyltransferase CMT3
blastp_kegg lcl|gmx:100799991 1 114 + 114 none 99.13 115 73.68 6e-48 uncharacterized LOC100799991
blastp_kegg lcl|cic:CICLE_v10017225mg 1 114 + 114 none 99.13 115 71.93 1e-47 hypothetical protein

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 107 115 9 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 46 66 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 40 45 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 86 106 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 16 16 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 17 39 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 67 85 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

3 Localization

Analysis Start End Length
TMHMM 50 67 17
TMHMM 15 37 22
TMHMM 82 104 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 36   Secretory pathway 2 0.935 0.142 NON-PLANT 36