Protein : Qrob_P0007960.2 Q. robur
Protein Identifier  ? Qrob_P0007960.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 124  
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0 Synonyms

0 GO Terms

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103954024 1 123 + 123 Gaps:2 100.00 121 75.21 2e-56 uncharacterized LOC103954024
blastp_kegg lcl|fve:101295497 1 123 + 123 Gaps:1 100.00 122 68.85 3e-54 uncharacterized protein LOC101295497
blastp_kegg lcl|tcc:TCM_040264 1 123 + 123 Gaps:4 100.00 121 72.73 2e-52 hypothetical protein
blastp_kegg lcl|pxb:103964157 16 123 + 108 Gaps:1 88.43 121 74.77 7e-49 uncharacterized LOC103964157
blastp_kegg lcl|mdm:103452444 16 123 + 108 Gaps:1 88.43 121 73.83 8e-49 uncharacterized LOC103452444
blastp_kegg lcl|pmum:103325716 1 123 + 123 Gaps:2 100.00 121 78.51 1e-46 uncharacterized LOC103325716
blastp_kegg lcl|pper:PRUPE_ppa013462mg 1 123 + 123 Gaps:2 100.00 121 76.86 8e-45 hypothetical protein
blastp_kegg lcl|mtr:MTR_5g084250 1 123 + 123 Gaps:1 100.00 122 67.21 3e-44 hypothetical protein
blastp_kegg lcl|cam:101504124 1 123 + 123 Gaps:1 100.00 124 68.55 6e-40 uncharacterized LOC101504124
blastp_kegg lcl|gmx:100780743 1 123 + 123 Gaps:1 73.81 168 70.16 9e-38 uncharacterized LOC100780743

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 51 73 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 16 16 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 40 50 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 17 39 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 93 113 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 74 92 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 114 123 10 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

3 Localization

Analysis Start End Length
TMHMM 94 113 19
TMHMM 15 37 22
TMHMM 57 79 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 37   Secretory pathway 1 0.985 0.026 NON-PLANT 37