Protein : Qrob_P0007950.2 Q. robur
Protein Identifier  ? Qrob_P0007950.2 Organism . Name  Quercus robur
Score  1.1 Score Type  egn
Protein Description  (M=43) PTHR21495 - NUCLEOPORIN-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 186  
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0 Synonyms

0 GO Terms

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103452445 1 185 + 185 Gaps:1 96.37 193 68.82 3e-93 dirigent protein 22-like
blastp_kegg lcl|mdm:103414484 1 185 + 185 Gaps:1 96.37 193 68.28 7e-92 dirigent protein 22-like
blastp_kegg lcl|pxb:103954022 1 185 + 185 Gaps:1 96.37 193 68.28 6e-90 dirigent protein 22-like
blastp_kegg lcl|gmx:100775617 8 185 + 178 Gaps:5 94.33 194 72.68 2e-89 disease resistance response protein 206-like
blastp_kegg lcl|mdm:103412655 1 185 + 185 Gaps:1 96.37 193 67.74 8e-89 dirigent protein 22-like
blastp_kegg lcl|mdm:103447015 1 185 + 185 Gaps:1 96.37 193 67.74 8e-89 dirigent protein 22-like
blastp_kegg lcl|pxb:103964166 1 185 + 185 Gaps:1 96.37 193 66.13 2e-88 dirigent protein 22-like
blastp_kegg lcl|fve:101296361 2 185 + 184 Gaps:2 95.88 194 69.35 2e-88 disease resistance response protein 206-like
blastp_kegg lcl|cic:CICLE_v10016828mg 7 185 + 179 Gaps:3 94.24 191 68.89 2e-87 hypothetical protein
blastp_kegg lcl|cit:102622229 7 185 + 179 Gaps:3 94.24 191 68.89 2e-87 dirigent protein 19-like
blastp_uniprot_sprot sp|Q9C523|DIR19_ARATH 4 185 + 182 Gaps:5 98.92 185 62.30 1e-76 Dirigent protein 19 OS Arabidopsis thaliana GN DIR19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C891|DIR20_ARATH 7 185 + 179 Gaps:4 97.86 187 57.38 4e-71 Dirigent protein 20 OS Arabidopsis thaliana GN DIR20 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LID5|DIR7_ARATH 11 185 + 175 none 94.09 186 57.71 7e-69 Dirigent protein 7 OS Arabidopsis thaliana GN DIR7 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FI66|DIR3_ARATH 8 185 + 178 Gaps:14 98.43 191 56.38 8e-68 Dirigent protein 3 OS Arabidopsis thaliana GN DIR3 PE 3 SV 1
blastp_uniprot_sprot sp|F4JDF3|DIR8_ARATH 2 172 + 171 Gaps:9 94.80 173 53.05 5e-54 Dirigent protein 8 OS Arabidopsis thaliana GN DIR8 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SS03|DIR21_ARATH 20 184 + 165 Gaps:3 88.89 189 47.02 1e-50 Dirigent protein 21 OS Arabidopsis thaliana GN DIR21 PE 1 SV 1
blastp_uniprot_sprot sp|Q66GI2|DIR22_ARATH 65 185 + 121 Gaps:1 97.60 125 63.11 1e-49 Dirigent protein 22 OS Arabidopsis thaliana GN DIR22 PE 2 SV 1
blastp_uniprot_sprot sp|Q84TH6|DIR23_ARATH 39 184 + 146 Gaps:3 79.68 187 48.99 2e-49 Dirigent protein 23 OS Arabidopsis thaliana GN DIR23 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIG7|DIR2_ARATH 32 184 + 153 Gaps:7 83.24 185 48.05 2e-46 Dirigent protein 2 OS Arabidopsis thaliana GN DIR2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIG6|DIR1_ARATH 36 184 + 149 Gaps:7 82.42 182 48.00 1e-44 Dirigent protein 1 OS Arabidopsis thaliana GN DIR1 PE 2 SV 1
rpsblast_cdd gnl|CDD|190504 41 184 + 144 Gaps:2 100.00 144 56.25 3e-53 pfam03018 Dirigent Dirigent-like protein. This family contains a number of proteins which are induced during disease response in plants. Members of this family are involved in lignification.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 42 184 143 PF03018 none Dirigent-like protein IPR004265
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 5 16 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 1 185 185 PTHR21495 none none none
Phobius 22 185 164 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 17 21 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

2 Localization

Analysis Start End Length
SignalP_EUK 1 21 20
TMHMM 5 27 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 1 0.967 0.021 NON-PLANT 21