Protein : Qrob_P0007930.2 Q. robur
Protein Identifier  ? Qrob_P0007930.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=43) PTHR21495 - NUCLEOPORIN-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 193  
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0 Synonyms

0 GO Terms

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10016828mg 1 192 + 192 Gaps:5 100.00 191 68.59 3e-91 hypothetical protein
blastp_kegg lcl|cit:102622229 1 192 + 192 Gaps:5 100.00 191 68.59 3e-91 dirigent protein 19-like
blastp_kegg lcl|mdm:103452445 1 192 + 192 Gaps:1 100.00 193 66.84 1e-90 dirigent protein 22-like
blastp_kegg lcl|pxb:103954022 1 192 + 192 Gaps:1 100.00 193 68.91 2e-89 dirigent protein 22-like
blastp_kegg lcl|mdm:103414484 1 192 + 192 Gaps:1 100.00 193 66.32 2e-89 dirigent protein 22-like
blastp_kegg lcl|mdm:103412655 1 192 + 192 Gaps:1 100.00 193 68.91 1e-88 dirigent protein 22-like
blastp_kegg lcl|mdm:103447015 1 192 + 192 Gaps:1 100.00 193 68.91 1e-88 dirigent protein 22-like
blastp_kegg lcl|gmx:100775617 5 192 + 188 Gaps:6 100.00 194 69.59 1e-88 disease resistance response protein 206-like
blastp_kegg lcl|fve:101296361 1 192 + 192 Gaps:2 100.00 194 67.01 2e-88 disease resistance response protein 206-like
blastp_kegg lcl|pxb:103964166 1 192 + 192 Gaps:1 100.00 193 64.77 1e-86 dirigent protein 22-like
blastp_uniprot_sprot sp|Q9C523|DIR19_ARATH 15 192 + 178 Gaps:5 96.76 185 61.45 3e-74 Dirigent protein 19 OS Arabidopsis thaliana GN DIR19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C891|DIR20_ARATH 14 192 + 179 Gaps:4 97.86 187 59.56 2e-72 Dirigent protein 20 OS Arabidopsis thaliana GN DIR20 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LID5|DIR7_ARATH 1 192 + 192 Gaps:6 100.00 186 55.91 2e-68 Dirigent protein 7 OS Arabidopsis thaliana GN DIR7 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FI66|DIR3_ARATH 1 192 + 192 Gaps:9 100.00 191 55.50 3e-68 Dirigent protein 3 OS Arabidopsis thaliana GN DIR3 PE 3 SV 1
blastp_uniprot_sprot sp|F4JDF3|DIR8_ARATH 1 179 + 179 Gaps:9 99.42 173 51.74 7e-55 Dirigent protein 8 OS Arabidopsis thaliana GN DIR8 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SS03|DIR21_ARATH 27 191 + 165 Gaps:3 88.89 189 49.40 3e-53 Dirigent protein 21 OS Arabidopsis thaliana GN DIR21 PE 1 SV 1
blastp_uniprot_sprot sp|Q66GI2|DIR22_ARATH 70 192 + 123 Gaps:1 99.20 125 63.71 3e-50 Dirigent protein 22 OS Arabidopsis thaliana GN DIR22 PE 2 SV 1
blastp_uniprot_sprot sp|Q84TH6|DIR23_ARATH 46 191 + 146 Gaps:3 79.68 187 48.32 2e-48 Dirigent protein 23 OS Arabidopsis thaliana GN DIR23 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIG7|DIR2_ARATH 36 191 + 156 Gaps:7 84.86 185 49.04 1e-46 Dirigent protein 2 OS Arabidopsis thaliana GN DIR2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIG6|DIR1_ARATH 43 191 + 149 Gaps:7 82.42 182 50.00 2e-45 Dirigent protein 1 OS Arabidopsis thaliana GN DIR1 PE 2 SV 1
rpsblast_cdd gnl|CDD|190504 48 191 + 144 Gaps:2 100.00 144 55.56 2e-54 pfam03018 Dirigent Dirigent-like protein. This family contains a number of proteins which are induced during disease response in plants. Members of this family are involved in lignification.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 28 28 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 20 28 9 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 29 192 164 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 49 191 143 PF03018 none Dirigent-like protein IPR004265
Phobius 4 19 16 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 5 192 188 PTHR21495 none none none

2 Localization

Analysis Start End Length
TMHMM 5 27 22
SignalP_EUK 1 28 27

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 28   Secretory pathway 1 0.978 0.007 NON-PLANT 28