Protein : Qrob_P0007820.2 Q. robur
Protein Identifier  ? Qrob_P0007820.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=460) PTHR11017//PTHR11017:SF146 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 188  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100854183 1 171 + 171 Gaps:8 29.96 544 57.67 5e-56 TMV resistance protein N-like
blastp_kegg lcl|fve:101295887 25 179 + 155 Gaps:1 25.79 605 57.69 1e-54 TMV resistance protein N-like
blastp_kegg lcl|fve:101302231 8 187 + 180 Gaps:7 11.21 1668 50.80 4e-54 TMV resistance protein N-like
blastp_kegg lcl|mdm:103423183 13 179 + 167 Gaps:1 84.42 199 51.79 7e-54 TMV resistance protein N-like
blastp_kegg lcl|fve:101310753 25 167 + 143 none 65.30 219 55.94 1e-53 TMV resistance protein N-like
blastp_kegg lcl|pop:POPTR_0019s00880g 25 170 + 146 none 89.57 163 56.16 3e-53 POPTRDRAFT_247935 hypothetical protein
blastp_kegg lcl|pmum:103343858 1 167 + 167 Gaps:2 13.38 1233 55.76 8e-53 TMV resistance protein N-like
blastp_kegg lcl|vvi:100243063 12 170 + 159 Gaps:1 13.76 1148 57.59 2e-52 TMV resistance protein N-like
blastp_kegg lcl|fve:101310168 11 175 + 165 Gaps:11 31.21 564 50.00 2e-52 TMV resistance protein N-like
blastp_kegg lcl|vvi:100247603 26 174 + 149 Gaps:1 17.61 852 60.00 3e-52 TMV resistance protein N-like
blastp_pdb 3ozi_B 4 170 + 167 Gaps:3 81.37 204 46.99 2e-46 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 4 170 + 167 Gaps:3 81.37 204 46.99 2e-46 mol:protein length:204 L6tr
blastp_pdb 3jrn_A 19 168 + 150 Gaps:2 84.09 176 45.27 2e-38 mol:protein length:176 AT1G72930 protein
blastp_pdb 3h16_D 14 127 + 114 Gaps:1 73.38 154 22.12 3e-06 mol:protein length:154 TIR protein
blastp_pdb 3h16_C 14 127 + 114 Gaps:1 73.38 154 22.12 3e-06 mol:protein length:154 TIR protein
blastp_pdb 3h16_B 14 127 + 114 Gaps:1 73.38 154 22.12 3e-06 mol:protein length:154 TIR protein
blastp_pdb 3h16_A 14 127 + 114 Gaps:1 73.38 154 22.12 3e-06 mol:protein length:154 TIR protein
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 25 167 + 143 none 12.50 1144 55.24 3e-46 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|Q9SSN3|TIR_ARATH 19 168 + 150 Gaps:2 84.09 176 45.27 6e-38 Toll/interleukin-1 receptor-like protein OS Arabidopsis thaliana GN TIR PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 17 169 + 153 Gaps:3 13.70 1095 48.67 1e-37 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 18 170 + 153 Gaps:4 11.45 1301 46.98 4e-31 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9FHE9|P2A08_ARATH 1 170 + 170 Gaps:14 44.07 354 39.10 3e-27 Protein PHLOEM PROTEIN 2-LIKE A8 OS Arabidopsis thaliana GN PP2A8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SYC9|VAP14_ARATH 15 162 + 148 Gaps:2 25.57 571 38.36 2e-23 Vesicle-associated protein 1-4 OS Arabidopsis thaliana GN PVA14 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FHE8|P2A06_ARATH 13 170 + 158 Gaps:3 40.05 392 40.13 9e-22 Protein PHLOEM PROTEIN 2-LIKE A6 OS Arabidopsis thaliana GN PP2A6 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C5Q9|P2A05_ARATH 28 173 + 146 Gaps:2 35.04 411 36.81 2e-19 Protein PHLOEM PROTEIN 2-LIKE A5 OS Arabidopsis thaliana GN PP2A5 PE 2 SV 1
rpsblast_cdd gnl|CDD|178749 15 169 + 155 Gaps:3 13.18 1153 51.32 2e-39 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201870 28 160 + 133 Gaps:2 100.00 135 45.19 7e-34 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|197607 26 165 + 140 Gaps:5 99.29 140 44.60 8e-32 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|178736 9 128 + 120 Gaps:7 60.43 187 38.05 1e-15 PLN03194 PLN03194 putative disease resistance protein Provisional.
rpsblast_cdd gnl|CDD|205852 28 127 + 100 Gaps:9 89.22 102 25.27 7e-12 pfam13676 TIR_2 TIR domain. This is a family of bacterial Toll-like receptors.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 15 170 156 PTHR11017:SF146 none none none
SUPERFAMILY 15 167 153 SSF52200 none none IPR000157
Gene3D 24 159 136 G3DSA:3.40.50.10140 none none IPR000157
Pfam 28 160 133 PF01582 none TIR domain IPR000157
PANTHER 15 170 156 PTHR11017 none none none
SMART 25 165 141 SM00255 none Toll - interleukin 1 - resistance IPR000157
ProSiteProfiles 24 165 142 PS50104 none TIR domain profile. IPR000157

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 15   Mitochondrion 4 0.037 0.669 NON-PLANT 15