Protein : Qrob_P0007810.2 Q. robur
Protein Identifier  ? Qrob_P0007810.2 Organism . Name  Quercus robur
Score  7.0 Score Type  egn
Protein Description  (M=4) KOG0444//KOG0472//KOG0531//KOG0618//KOG4658 - Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Leucine-rich repeat protein [Function unknown]. // Protein phosphatase 1 regulatory subunit and related proteins [Signal transduction mechanisms]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // Apoptotic ATPase [Signal transduction mechanisms]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 958  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.

28 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101295181 7 942 + 936 Gaps:131 81.73 1166 40.50 0.0 TMV resistance protein N-like
blastp_kegg lcl|rcu:RCOM_0458060 30 954 + 925 Gaps:130 95.12 943 41.69 2e-176 leucine-rich repeat-containing protein putative
blastp_kegg lcl|pper:PRUPE_ppa023967mg 1 956 + 956 Gaps:123 82.40 1142 40.49 2e-165 hypothetical protein
blastp_kegg lcl|pxb:103935100 1 927 + 927 Gaps:140 68.26 1402 38.45 2e-164 TMV resistance protein N-like
blastp_kegg lcl|cic:CICLE_v10023938mg 1 954 + 954 Gaps:186 79.90 1254 38.72 9e-164 hypothetical protein
blastp_kegg lcl|pmum:103336332 1 898 + 898 Gaps:123 80.23 1123 39.62 6e-163 TMV resistance protein N-like
blastp_kegg lcl|pper:PRUPE_ppa016158mg 1 940 + 940 Gaps:124 81.05 1177 39.62 7e-163 hypothetical protein
blastp_kegg lcl|mdm:103402160 33 898 + 866 Gaps:137 77.46 1127 41.47 7e-162 HD8 TMV resistance protein N-like
blastp_kegg lcl|cic:CICLE_v10023905mg 53 954 + 902 Gaps:137 99.44 898 40.99 9e-162 hypothetical protein
blastp_kegg lcl|fve:101302874 20 911 + 892 Gaps:108 77.52 1143 40.52 2e-161 TMV resistance protein N-like
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 16 821 + 806 Gaps:138 74.30 1144 36.12 9e-116 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 1 806 + 806 Gaps:105 68.58 1095 34.49 6e-98 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL92|WRK16_ARATH 3 702 + 700 Gaps:86 50.87 1372 34.96 2e-89 Probable WRKY transcription factor 16 OS Arabidopsis thaliana GN WRKY16 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 22 798 + 777 Gaps:220 67.56 1301 39.36 3e-89 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9FH83|WRK52_ARATH 16 668 + 653 Gaps:72 52.72 1288 35.35 1e-83 Probable WRKY transcription factor 52 OS Arabidopsis thaliana GN WRKY52 PE 2 SV 3
blastp_uniprot_sprot sp|Q9SZ67|WRK19_ARATH 1 638 + 638 Gaps:28 33.56 1895 34.59 3e-83 Probable WRKY transcription factor 19 OS Arabidopsis thaliana GN WRKY19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FKN7|DAR4_ARATH 23 711 + 689 Gaps:93 41.79 1613 33.53 9e-73 Protein DA1-related 4 OS Arabidopsis thaliana GN DAR4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LVT1|DRL39_ARATH 18 629 + 612 Gaps:146 92.78 623 26.12 4e-18 Putative disease resistance protein At5g47280 OS Arabidopsis thaliana GN At5g47280 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SZA7|DRL29_ARATH 24 546 + 523 Gaps:67 65.69 816 25.93 1e-17 Probable disease resistance protein At4g33300 OS Arabidopsis thaliana GN At4g33300 PE 2 SV 3
blastp_uniprot_sprot sp|Q9FW44|ADR1_ARATH 21 609 + 589 Gaps:132 71.79 787 27.43 1e-14 Disease resistance protein ADR1 OS Arabidopsis thaliana GN ADR1 PE 2 SV 2
rpsblast_cdd gnl|CDD|178749 20 754 + 735 Gaps:60 66.52 1153 34.94 1e-100 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201512 22 263 + 242 Gaps:15 87.37 285 29.72 5e-29 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|177728 392 654 + 263 Gaps:60 27.58 968 30.34 1e-07 PLN00113 PLN00113 leucine-rich repeat receptor-like protein kinase Provisional.
rpsblast_kog gnl|CDD|39857 18 686 + 669 Gaps:128 77.05 889 24.96 2e-34 KOG4658 KOG4658 KOG4658 Apoptotic ATPase [Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35693 399 636 + 238 Gaps:27 38.05 565 27.91 6e-10 KOG0472 KOG0472 KOG0472 Leucine-rich repeat protein [Function unknown].
rpsblast_kog gnl|CDD|35665 336 650 + 315 Gaps:113 27.57 1255 36.71 2e-08 KOG0444 KOG0444 KOG0444 Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton].
rpsblast_kog gnl|CDD|35838 409 679 + 271 Gaps:82 39.04 1081 27.49 3e-08 KOG0618 KOG0618 KOG0618 Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35751 414 654 + 241 Gaps:6 58.21 414 23.65 4e-07 KOG0531 KOG0531 KOG0531 Protein phosphatase 1 regulatory subunit and related proteins [Signal transduction mechanisms].

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 550 550 PTHR11017 none none none
PANTHER 609 686 78 PTHR11017 none none none
SUPERFAMILY 2 250 249 SSF52540 none none IPR027417
SMART 579 602 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 603 626 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
Pfam 18 260 243 PF00931 none NB-ARC domain IPR002182
Pfam 490 512 23 PF00560 none Leucine Rich Repeat IPR001611
PRINTS 22 37 16 PR00364 none Disease resistance protein signature none
PRINTS 191 205 15 PR00364 none Disease resistance protein signature none
PRINTS 624 640 17 PR00364 none Disease resistance protein signature none
PRINTS 98 112 15 PR00364 none Disease resistance protein signature none
Pfam 420 438 19 PF07725 none Leucine Rich Repeat IPR011713
Gene3D 21 173 153 G3DSA:3.40.50.300 none none IPR027417
SUPERFAMILY 361 687 327 SSF52058 none none none
SUPERFAMILY 296 311 16 SSF52058 none none none
PANTHER 1 550 550 PTHR11017:SF146 none none none
PANTHER 609 686 78 PTHR11017:SF146 none none none
Pfam 573 616 44 PF13855 none Leucine rich repeat IPR001611
Gene3D 359 673 315 G3DSA:3.80.10.10 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting