Protein : Qrob_P0007780.2 Q. robur
Protein Identifier  ? Qrob_P0007780.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=515) PTHR11017 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Gene Prediction Quality  validated
Protein length 

Sequence

Length: 173  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0008s22420g 24 171 + 148 Gaps:4 86.21 174 58.67 9e-58 hypothetical protein
blastp_kegg lcl|mdm:103423183 27 171 + 145 Gaps:4 73.87 199 59.18 1e-55 TMV resistance protein N-like
blastp_kegg lcl|fve:101293148 1 168 + 168 Gaps:13 83.42 193 57.14 3e-54 TMV resistance protein N-like
blastp_kegg lcl|pxb:103963109 3 171 + 169 Gaps:13 21.66 748 58.02 3e-53 TMV resistance protein N-like
blastp_kegg lcl|pop:POPTR_0182s00230g 27 171 + 145 Gaps:6 88.17 169 58.39 2e-52 hypothetical protein
blastp_kegg lcl|pxb:103956285 13 171 + 159 Gaps:5 25.12 637 58.13 3e-52 TMV resistance protein N-like
blastp_kegg lcl|pop:POPTR_0019s00880g 24 172 + 149 Gaps:2 92.64 163 54.97 4e-52 POPTRDRAFT_247935 hypothetical protein
blastp_kegg lcl|pxb:103935009 13 171 + 159 Gaps:5 12.91 1239 57.50 1e-51 TMV resistance protein N-like
blastp_kegg lcl|pop:POPTR_0017s13775g 25 171 + 147 Gaps:4 88.17 169 53.69 2e-51 hypothetical protein
blastp_kegg lcl|vvi:100256761 27 168 + 142 Gaps:1 11.28 1250 61.70 2e-51 TMV resistance protein N-like
blastp_pdb 3ozi_B 7 169 + 163 Gaps:9 77.45 204 48.10 9e-41 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 7 169 + 163 Gaps:9 77.45 204 48.10 9e-41 mol:protein length:204 L6tr
blastp_pdb 3jrn_A 26 166 + 141 Gaps:2 80.11 176 50.35 6e-40 mol:protein length:176 AT1G72930 protein
blastp_pdb 3h16_D 27 138 + 112 Gaps:1 72.08 154 26.13 1e-07 mol:protein length:154 TIR protein
blastp_pdb 3h16_C 27 138 + 112 Gaps:1 72.08 154 26.13 1e-07 mol:protein length:154 TIR protein
blastp_pdb 3h16_B 27 138 + 112 Gaps:1 72.08 154 26.13 1e-07 mol:protein length:154 TIR protein
blastp_pdb 3h16_A 27 138 + 112 Gaps:1 72.08 154 26.13 1e-07 mol:protein length:154 TIR protein
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 24 166 + 143 Gaps:4 12.67 1144 54.48 7e-44 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|Q9SSN3|TIR_ARATH 26 166 + 141 Gaps:2 80.11 176 50.35 2e-39 Toll/interleukin-1 receptor-like protein OS Arabidopsis thaliana GN TIR PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 13 168 + 156 Gaps:12 14.06 1095 46.75 2e-33 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 27 170 + 144 Gaps:4 10.91 1301 51.41 3e-33 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9FHE9|P2A08_ARATH 6 172 + 167 Gaps:14 44.35 354 36.94 1e-25 Protein PHLOEM PROTEIN 2-LIKE A8 OS Arabidopsis thaliana GN PP2A8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FHE8|P2A06_ARATH 14 172 + 159 Gaps:10 40.56 392 40.25 4e-23 Protein PHLOEM PROTEIN 2-LIKE A6 OS Arabidopsis thaliana GN PP2A6 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C5Q9|P2A05_ARATH 28 149 + 122 Gaps:11 31.39 411 41.86 1e-21 Protein PHLOEM PROTEIN 2-LIKE A5 OS Arabidopsis thaliana GN PP2A5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SYC9|VAP14_ARATH 26 161 + 136 Gaps:14 23.82 571 38.24 2e-20 Vesicle-associated protein 1-4 OS Arabidopsis thaliana GN PVA14 PE 2 SV 1
rpsblast_cdd gnl|CDD|178749 14 170 + 157 Gaps:5 13.36 1153 50.65 9e-38 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201870 29 157 + 129 Gaps:6 98.52 135 49.62 3e-34 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|197607 26 164 + 139 Gaps:7 100.00 140 44.29 5e-30 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|178736 28 129 + 102 Gaps:4 52.41 187 37.76 5e-16 PLN03194 PLN03194 putative disease resistance protein Provisional.
rpsblast_cdd gnl|CDD|205852 29 128 + 100 Gaps:9 89.22 102 25.27 1e-10 pfam13676 TIR_2 TIR domain. This is a family of bacterial Toll-like receptors.

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 23 167 145 SSF52200 none none IPR000157
SMART 26 164 139 SM00255 none Toll - interleukin 1 - resistance IPR000157
Pfam 29 158 130 PF01582 none TIR domain IPR000157
PANTHER 13 171 159 PTHR11017 none none none
Gene3D 25 154 130 G3DSA:3.40.50.10140 none none IPR000157
ProSiteProfiles 25 164 140 PS50104 none TIR domain profile. IPR000157

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 61   Mitochondrion 5 0.023 0.594 NON-PLANT 61