Protein : Qrob_P0007390.2 Q. robur
Protein Identifier  ? Qrob_P0007390.2 Organism . Name  Quercus robur
Score  91.1 Score Type  egn
Protein Description  (M=8) PTHR19139//PTHR19139:SF88 - AQUAPORIN TRANSPORTER // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 139  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10012382mg 7 123 + 117 Gaps:3 55.88 204 78.07 4e-51 hypothetical protein
blastp_kegg lcl|cit:102612686 7 123 + 117 Gaps:3 39.72 287 78.07 8e-50 aquaporin NIP2-1-like
blastp_kegg lcl|vvi:100265406 9 123 + 115 Gaps:4 40.48 294 73.95 3e-49 aquaporin NIP2-1-like
blastp_kegg lcl|pper:PRUPE_ppa016771mg 4 123 + 120 Gaps:5 39.38 292 72.17 4e-49 hypothetical protein
blastp_kegg lcl|pmum:103330217 4 123 + 120 Gaps:5 40.35 285 72.17 1e-48 aquaporin NIP2-1-like
blastp_kegg lcl|cmo:103487002 12 123 + 112 Gaps:5 37.98 287 74.31 4e-46 aquaporin NIP2-1-like
blastp_kegg lcl|csv:101205692 12 123 + 112 Gaps:5 37.85 288 73.39 1e-45 aquaporin NIP2-1-like
blastp_kegg lcl|csv:101224887 12 123 + 112 Gaps:5 37.85 288 73.39 1e-45 aquaporin NIP2-1-like
blastp_kegg lcl|fve:101292726 14 123 + 110 Gaps:11 36.40 272 81.82 1e-45 aquaporin NIP2-1-like
blastp_kegg lcl|fve:101297574 39 123 + 85 none 30.14 282 87.06 3e-45 aquaporin NIP2-1-like
blastp_pdb 3nkc_B 45 123 + 79 Gaps:1 34.19 234 46.25 8e-14 mol:protein length:234 Aquaporin Z
blastp_pdb 3nkc_A 45 123 + 79 Gaps:1 34.19 234 46.25 8e-14 mol:protein length:234 Aquaporin Z
blastp_pdb 3nka_B 45 123 + 79 Gaps:1 34.19 234 46.25 1e-13 mol:protein length:234 Aquaporin Z
blastp_pdb 3nka_A 45 123 + 79 Gaps:1 34.19 234 46.25 1e-13 mol:protein length:234 Aquaporin Z
blastp_pdb 2abm_H 45 123 + 79 Gaps:1 34.63 231 46.25 1e-13 mol:protein length:231 Aquaporin Z
blastp_pdb 2abm_G 45 123 + 79 Gaps:1 34.63 231 46.25 1e-13 mol:protein length:231 Aquaporin Z
blastp_pdb 2abm_F 45 123 + 79 Gaps:1 34.63 231 46.25 1e-13 mol:protein length:231 Aquaporin Z
blastp_pdb 2abm_E 45 123 + 79 Gaps:1 34.63 231 46.25 1e-13 mol:protein length:231 Aquaporin Z
blastp_pdb 2abm_D 45 123 + 79 Gaps:1 34.63 231 46.25 1e-13 mol:protein length:231 Aquaporin Z
blastp_pdb 2abm_C 45 123 + 79 Gaps:1 34.63 231 46.25 1e-13 mol:protein length:231 Aquaporin Z
blastp_uniprot_sprot sp|Q19KC1|NIP21_MAIZE 1 123 + 123 Gaps:1 42.03 295 57.26 8e-40 Aquaporin NIP2-1 OS Zea mays GN NIP2-1 PE 2 SV 2
blastp_uniprot_sprot sp|Q6Z2T3|NIP21_ORYSJ 13 123 + 111 Gaps:3 37.58 298 60.71 2e-38 Aquaporin NIP2-1 OS Oryza sativa subsp. japonica GN NIP2-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q67WJ8|NIP22_ORYSJ 13 123 + 111 Gaps:2 37.92 298 58.41 5e-38 Aquaporin NIP2-2 OS Oryza sativa subsp. japonica GN NIP2-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ATN2|NIP22_MAIZE 13 123 + 111 Gaps:2 38.44 294 59.29 1e-37 Aquaporin NIP2-2 OS Zea mays GN NIP2-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9AT74|NIP23_MAIZE 36 123 + 88 none 29.24 301 68.18 5e-35 Aquaporin NIP2-3 OS Zea mays GN NIP2-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q40746|NIP11_ORYSJ 44 123 + 80 none 28.17 284 52.50 3e-24 Aquaporin NIP1-1 OS Oryza sativa subsp. japonica GN NIP1-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ATN4|NIP11_MAIZE 44 123 + 80 none 28.37 282 50.00 3e-22 Aquaporin NIP1-1 OS Zea mays GN NIP1-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VZW1|NIP11_ARATH 9 123 + 115 Gaps:10 38.18 296 45.13 1e-21 Aquaporin NIP1-1 OS Arabidopsis thaliana GN NIP1-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8LFP7|NIP12_ARATH 44 123 + 80 none 27.21 294 50.00 1e-20 Aquaporin NIP1-2 OS Arabidopsis thaliana GN NIP1-2 PE 1 SV 2
blastp_uniprot_sprot sp|Q0DK16|NIP13_ORYSJ 44 123 + 80 none 27.97 286 48.75 2e-19 Aquaporin NIP1-3 OS Oryza sativa subsp. japonica GN NIP1-3 PE 3 SV 2

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 47 47 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 44 124 81 SSF81338 none none IPR023271
PRINTS 46 65 20 PR00783 none Major intrinsic protein family signature IPR000425
PRINTS 85 109 25 PR00783 none Major intrinsic protein family signature IPR000425
ProSitePatterns 103 111 9 PS00221 none MIP family signature. IPR022357
Gene3D 44 124 81 G3DSA:1.20.1080.10 none none IPR023271
Phobius 48 67 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 79 97 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 98 138 41 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 44 123 80 PF00230 none Major intrinsic protein IPR000425
Phobius 68 78 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 44 124 81 PTHR19139:SF88 none none none
PANTHER 44 124 81 PTHR19139 none none IPR000425

2 Localization

Analysis Start End Length
TMHMM 79 101 22
TMHMM 48 70 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting