Protein : Qrob_P0006690.2 Q. robur
Protein Identifier  ? Qrob_P0006690.2 Organism . Name  Quercus robur
Score  95.6 Score Type  egn
Protein Description  (M=1) PF00646//PF07723 - F-box domain // Leucine Rich Repeat Gene Prediction Quality  validated
Protein length 

Sequence

Length: 342  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_031424 5 289 + 285 Gaps:25 67.31 413 36.69 1e-39 F-box/RNI/FBD-like domains-containing protein putative isoform 1
blastp_kegg lcl|tcc:TCM_031423 24 312 + 289 Gaps:21 63.25 449 36.97 1e-37 F-box/RNI/FBD-like domains-containing protein putative
blastp_kegg lcl|pxb:103960134 16 330 + 315 Gaps:36 87.92 356 33.55 2e-29 putative FBD-associated F-box protein At3g50710
blastp_kegg lcl|eus:EUTSA_v10027130mg 22 282 + 261 Gaps:23 66.49 376 36.80 7e-29 hypothetical protein
blastp_kegg lcl|pxb:103960072 16 313 + 298 Gaps:30 68.79 439 33.11 2e-28 FBD-associated F-box protein At4g10400-like
blastp_kegg lcl|ath:AT5G60610 24 296 + 273 Gaps:31 68.04 388 35.61 7e-28 FBD-associated F-box protein
blastp_kegg lcl|brp:103841402 24 287 + 264 Gaps:23 61.93 415 34.63 1e-27 FBD-associated F-box protein At4g10400-like
blastp_kegg lcl|brp:103841395 24 319 + 296 Gaps:33 69.62 418 32.65 2e-27 FBD-associated F-box protein At4g10400-like
blastp_kegg lcl|mtr:MTR_5g084070 25 261 + 237 Gaps:23 49.54 436 43.06 2e-27 F-box/LRR-repeat protein
blastp_kegg lcl|pxb:103934882 25 289 + 265 Gaps:48 64.08 451 33.91 8e-27 FBD-associated F-box protein At5g60610-like
blastp_uniprot_sprot sp|Q9FF58|FBD30_ARATH 24 296 + 273 Gaps:31 68.04 388 35.61 3e-29 FBD-associated F-box protein At5g60610 OS Arabidopsis thaliana GN At5g60610 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FJU3|FBD28_ARATH 27 293 + 267 Gaps:27 65.67 402 34.47 5e-28 Putative FBD-associated F-box protein At5g56690 OS Arabidopsis thaliana GN At5g56690 PE 4 SV 1
blastp_uniprot_sprot sp|Q9FJU2|FBD37_ARATH 27 293 + 267 Gaps:33 64.32 398 34.77 2e-26 Putative FBD-associated F-box protein At5g56700 OS Arabidopsis thaliana GN At5g56700 PE 2 SV 2
blastp_uniprot_sprot sp|Q8L7H1|FBL75_ARATH 21 327 + 307 Gaps:35 80.31 381 32.03 4e-25 F-box/LRR-repeat protein At4g14103 OS Arabidopsis thaliana GN At4g14103 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FM94|FBD21_ARATH 24 289 + 266 Gaps:28 59.38 421 36.80 1e-24 FBD-associated F-box protein At5g56370 OS Arabidopsis thaliana GN At5g56370 PE 2 SV 1
blastp_uniprot_sprot sp|Q3EAE5|FDL24_ARATH 24 262 + 239 Gaps:15 52.61 441 35.78 1e-24 Putative F-box/FBD/LRR-repeat protein At4g00315 OS Arabidopsis thaliana GN At4g00315 PE 4 SV 1
blastp_uniprot_sprot sp|Q9SV82|FBD40_ARATH 24 286 + 263 Gaps:23 61.61 409 34.13 4e-24 FBD-associated F-box protein At4g10400 OS Arabidopsis thaliana GN At4g10400 PE 2 SV 2
blastp_uniprot_sprot sp|Q6NKX3|FDL14_ARATH 21 269 + 249 Gaps:23 54.91 448 34.96 1e-23 F-box/FBD/LRR-repeat protein At2g04230 OS Arabidopsis thaliana GN At2g04230 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LJF8|FBL47_ARATH 25 284 + 260 Gaps:28 81.70 306 34.40 2e-23 F-box/LRR-repeat protein At3g26922 OS Arabidopsis thaliana GN At3g26922 PE 2 SV 2
blastp_uniprot_sprot sp|Q8H1M0|FDL16_ARATH 25 331 + 307 Gaps:48 69.00 442 33.11 5e-23 F-box/FBD/LRR-repeat protein At2g26030 OS Arabidopsis thaliana GN At2g26030 PE 2 SV 2

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 30 70 41 SM00256 none A Receptor for Ubiquitination Targets IPR001810
Gene3D 25 267 243 G3DSA:3.80.10.10 none none none
SUPERFAMILY 23 99 77 SSF81383 none none IPR001810
Pfam 180 205 26 PF07723 none Leucine Rich Repeat IPR013101
PANTHER 25 327 303 PTHR32212 none none none
SUPERFAMILY 105 279 175 SSF52047 none none none
PANTHER 25 327 303 PTHR32212:SF56 none none none
Pfam 26 61 36 PF00646 none F-box domain IPR001810

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7

0 Targeting