Protein : Qrob_P0006650.2 Q. robur
Protein Identifier  ? Qrob_P0006650.2 Organism . Name  Quercus robur
Score  94.4 Score Type  egn
Protein Description  (M=29) PF00646//PF08387 - F-box domain // FBD Gene Prediction Quality  validated
Protein length 

Sequence

Length: 616  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103960072 58 514 + 457 Gaps:45 95.67 439 35.71 8e-46 FBD-associated F-box protein At4g10400-like
blastp_kegg lcl|tcc:TCM_031423 52 514 + 463 Gaps:42 94.65 449 35.76 1e-45 F-box/RNI/FBD-like domains-containing protein putative
blastp_kegg lcl|mdm:103432206 58 514 + 457 Gaps:45 95.67 439 35.48 2e-44 FBD-associated F-box protein At4g10400-like
blastp_kegg lcl|pxb:103934884 53 487 + 435 Gaps:68 94.92 433 33.09 7e-42 F-box/LRR-repeat protein At4g14103-like
blastp_kegg lcl|pxb:103949959 53 487 + 435 Gaps:68 94.92 433 33.09 7e-42 F-box/LRR-repeat protein At4g14103-like
blastp_kegg lcl|pper:PRUPE_ppa005417mg 43 514 + 472 Gaps:62 93.51 462 33.56 2e-41 hypothetical protein
blastp_kegg lcl|mdm:103448784 58 487 + 430 Gaps:44 90.95 464 31.28 1e-40 F-box/FBD/LRR-repeat protein At1g16930-like
blastp_kegg lcl|mdm:103448794 58 487 + 430 Gaps:48 93.76 433 33.50 3e-40 F-box/LRR-repeat protein At4g14103-like
blastp_kegg lcl|pxb:103926900 49 514 + 466 Gaps:74 98.25 456 32.59 6e-39 F-box/LRR-repeat protein At4g14103-like
blastp_kegg lcl|fve:101290991 56 510 + 455 Gaps:76 94.06 488 31.15 1e-38 F-box/FBD/LRR-repeat protein At1g16930-like
blastp_uniprot_sprot sp|Q8LF09|FDL23_ARATH 58 514 + 457 Gaps:49 93.16 453 35.31 1e-37 F-box/FBD/LRR-repeat protein At4g00160 OS Arabidopsis thaliana GN At4g00160 PE 2 SV 2
blastp_uniprot_sprot sp|Q8H1R7|FDL27_ARATH 59 496 + 438 Gaps:50 94.51 419 34.09 2e-36 F-box/FBD/LRR-repeat protein At4g26340 OS Arabidopsis thaliana GN At4g26340 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LXJ6|FDL21_ARATH 58 483 + 426 Gaps:54 84.21 456 38.28 2e-36 F-box/FBD/LRR-repeat protein At3g52680 OS Arabidopsis thaliana GN At3g52680 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SCQ5|FBD10_ARATH 59 496 + 438 Gaps:47 93.91 427 31.67 2e-31 Putative FBD-associated F-box protein At3g50710 OS Arabidopsis thaliana GN At3g50710 PE 4 SV 1
blastp_uniprot_sprot sp|Q8L7H1|FBL75_ARATH 58 430 + 373 Gaps:44 93.70 381 30.81 4e-31 F-box/LRR-repeat protein At4g14103 OS Arabidopsis thaliana GN At4g14103 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FF58|FBD30_ARATH 59 487 + 429 Gaps:76 99.23 388 34.03 2e-30 FBD-associated F-box protein At5g60610 OS Arabidopsis thaliana GN At5g60610 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LXJ7|FBD11_ARATH 58 487 + 430 Gaps:74 88.46 416 34.24 3e-30 FBD-associated F-box protein At3g52670 OS Arabidopsis thaliana GN At3g52670 PE 4 SV 2
blastp_uniprot_sprot sp|O22232|FBL52_ARATH 61 422 + 362 Gaps:21 77.01 448 30.72 2e-29 Putative F-box/LRR-repeat protein At3g44810 OS Arabidopsis thaliana GN At3g44810 PE 4 SV 2
blastp_uniprot_sprot sp|Q94B46|FBL74_ARATH 58 422 + 365 Gaps:41 73.08 468 31.58 4e-29 F-box/LRR-repeat protein At4g14096 OS Arabidopsis thaliana GN At4g14096 PE 2 SV 1
blastp_uniprot_sprot sp|Q6NKX3|FDL14_ARATH 58 483 + 426 Gaps:51 87.72 448 31.55 2e-28 F-box/FBD/LRR-repeat protein At2g04230 OS Arabidopsis thaliana GN At2g04230 PE 2 SV 1
rpsblast_cdd gnl|CDD|197797 448 609 + 162 Gaps:2 100.00 72 47.22 1e-09 smart00579 FBD domain in FBox and BRCT domain containing plant proteins.
rpsblast_cdd gnl|CDD|203925 439 489 + 51 none 100.00 51 41.18 2e-09 pfam08387 FBD FBD. This region is found in F-box (pfam00646) and other domain containing plant proteins it is repeated in two family members. Its precise function is unknown but it is thought to be associated with nuclear processes. In fact several family members are annotated as being similar to transcription factors.

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 58 108 51 SSF81383 none none IPR001810
Gene3D 58 290 233 G3DSA:3.80.10.10 none none none
SUPERFAMILY 136 310 175 SSF52047 none none none
PANTHER 10 512 503 PTHR32212 none none none
Pfam 60 96 37 PF00646 none F-box domain IPR001810
Coils 1 30 30 Coil none none none
Pfam 531 577 47 PF08387 none FBD IPR006566
Pfam 442 487 46 PF08387 none FBD IPR006566
PANTHER 10 512 503 PTHR32212:SF56 none none none
SMART 448 517 70 SM00579 none domain in FBox and BRCT domain containing plant proteins IPR006566
SMART 537 609 73 SM00579 none domain in FBox and BRCT domain containing plant proteins IPR006566

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7

0 Targeting