Protein : Qrob_P0006640.2 Q. robur
Protein Identifier  ? Qrob_P0006640.2 Organism . Name  Quercus robur
Score  27.1 Score Type  egn
Protein Description  (M=29) PF00646//PF08387 - F-box domain // FBD Gene Prediction Quality  validated
Protein length 

Sequence

Length: 381  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100780535 5 375 + 371 Gaps:192 95.84 794 31.93 2e-21 uncharacterized LOC100780535
blastp_kegg lcl|mtr:MTR_3g108150 19 374 + 356 Gaps:60 96.64 387 28.88 4e-21 FBD-associated F-box protein
blastp_kegg lcl|gmx:102669752 18 375 + 358 Gaps:79 99.73 372 32.08 4e-19 F-box/FBD/LRR-repeat protein At5g56420-like
blastp_kegg lcl|mtr:MTR_7g098510 3 375 + 373 Gaps:35 99.74 391 26.67 4e-19 F-box/FBD/LRR-repeat protein
blastp_kegg lcl|mtr:MTR_7g098480 3 377 + 375 Gaps:33 81.93 476 28.21 5e-19 F-box/FBD/LRR-repeat protein
blastp_kegg lcl|pper:PRUPE_ppa016126mg 17 374 + 358 Gaps:68 94.32 352 32.23 1e-18 hypothetical protein
blastp_kegg lcl|mtr:MTR_7g083740 10 374 + 365 Gaps:72 96.73 367 29.86 2e-18 F-box/LRR-repeat protein
blastp_kegg lcl|mtr:MTR_7g032380 17 375 + 359 Gaps:79 97.75 356 32.47 7e-18 F-box/FBD/LRR-repeat protein
blastp_kegg lcl|mtr:MTR_3g107160 12 348 + 337 Gaps:75 83.72 430 27.50 8e-18 F-box/FBD/LRR-repeat protein
blastp_kegg lcl|mtr:MTR_1g042650 19 374 + 356 Gaps:76 80.89 450 30.22 1e-17 F-box/LRR-repeat protein
blastp_uniprot_sprot sp|Q9LXQ7|FB209_ARATH 19 345 + 327 Gaps:67 88.25 417 25.27 3e-14 Putative F-box protein At3g58950 OS Arabidopsis thaliana GN At3g58950 PE 4 SV 1
blastp_uniprot_sprot sp|Q9LXS0|FB206_ARATH 19 350 + 332 Gaps:62 88.14 413 27.47 3e-14 Putative F-box protein At3g58820 OS Arabidopsis thaliana GN At3g58820 PE 4 SV 1
blastp_uniprot_sprot sp|Q3E8L5|FBL85_ARATH 19 343 + 325 Gaps:92 90.07 403 27.55 6e-14 Putative F-box/LRR-repeat protein At5g38386 OS Arabidopsis thaliana GN At5g38386 PE 4 SV 1
blastp_uniprot_sprot sp|Q94B46|FBL74_ARATH 19 375 + 357 Gaps:114 95.09 468 26.07 2e-11 F-box/LRR-repeat protein At4g14096 OS Arabidopsis thaliana GN At4g14096 PE 2 SV 1
blastp_uniprot_sprot sp|O23257|FBL72_ARATH 19 354 + 336 Gaps:78 91.24 434 25.51 5e-11 Putative F-box/LRR-repeat protein At4g13960 OS Arabidopsis thaliana GN At4g13960 PE 4 SV 1
blastp_uniprot_sprot sp|Q9FNK0|FDL30_ARATH 19 181 + 163 Gaps:14 34.86 502 33.14 6e-11 Putative F-box/FBD/LRR-repeat protein At5g22610 OS Arabidopsis thaliana GN At5g22610 PE 4 SV 1
blastp_uniprot_sprot sp|Q9C8Y6|FBD5_ARATH 1 372 + 372 Gaps:107 99.32 442 26.20 9e-11 FBD-associated F-box protein At1g66310 OS Arabidopsis thaliana GN At1g66310 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LJF9|FDL44_ARATH 85 374 + 290 Gaps:33 61.98 434 27.14 2e-10 F-box/FBD/LRR-repeat protein At3g26920 OS Arabidopsis thaliana GN At3g26920 PE 2 SV 3
blastp_uniprot_sprot sp|Q9FLA3|FBD42_ARATH 19 375 + 357 Gaps:66 98.94 377 29.22 9e-10 Putative FBD-associated F-box protein At5g44940 OS Arabidopsis thaliana GN At5g44940 PE 4 SV 2
blastp_uniprot_sprot sp|Q56W59|FBL84_ARATH 17 374 + 358 Gaps:120 99.34 455 25.66 1e-09 F-box/LRR-repeat protein At5g35995 OS Arabidopsis thaliana GN At5g35995 PE 2 SV 1
rpsblast_cdd gnl|CDD|197797 303 375 + 73 Gaps:1 100.00 72 43.06 1e-11 smart00579 FBD domain in FBox and BRCT domain containing plant proteins.
rpsblast_cdd gnl|CDD|203925 294 344 + 51 none 100.00 51 45.10 1e-10 pfam08387 FBD FBD. This region is found in F-box (pfam00646) and other domain containing plant proteins it is repeated in two family members. Its precise function is unknown but it is thought to be associated with nuclear processes. In fact several family members are annotated as being similar to transcription factors.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 20 54 35 PF00646 none F-box domain IPR001810
SMART 303 375 73 SM00579 none domain in FBox and BRCT domain containing plant proteins IPR006566
PANTHER 19 380 362 PTHR32212:SF56 none none none
Pfam 296 343 48 PF08387 none FBD IPR006566
Gene3D 14 55 42 G3DSA:1.20.1280.50 none none none
PANTHER 19 380 362 PTHR32212 none none none
SUPERFAMILY 10 86 77 SSF81383 none none IPR001810

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7

0 Targeting